Homologs in group_1464

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_09385 FBDBKF_09385 100.0 Morganella morganii S1 orgB Invasion protein OrgB
EHELCC_10025 EHELCC_10025 100.0 Morganella morganii S2 orgB Invasion protein OrgB
NLDBIP_10370 NLDBIP_10370 100.0 Morganella morganii S4 orgB Invasion protein OrgB
LHKJJB_10985 LHKJJB_10985 100.0 Morganella morganii S3 orgB Invasion protein OrgB
F4V73_RS10580 F4V73_RS10580 54.7 Morganella psychrotolerans - hypothetical protein
PMI_RS13320 PMI_RS13320 22.6 Proteus mirabilis HI4320 - hypothetical protein

Distribution of the homologs in the orthogroup group_1464

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1464

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0CL45 2.88e-07 52 22 5 184 1 sctL1 SPI-1 type 3 secretion system stator protein Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
E1WAB4 2.88e-07 52 22 5 184 2 sctL1 SPI-1 type 3 secretion system stator protein Salmonella typhimurium (strain SL1344)

  • Number of RefSeq hits:

General

Source Morganella morganii S5
Locus tag HKOGLL_14045
Feature type CDS
Gene orgB
Product Invasion protein OrgB
Location 107195 - 107794 (strand: 1)
Length 600 (nucleotides) / 199 (amino acids)

Contig

Accession ZDB_692
Length 124746 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1464
Orthogroup size 7
N. genomes 7

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Genomic region

Protein Sequence

MCRSLPDSLLSHIRHGVLIKDRHVSALCRLSNLTRQANQHAARLIKQAEDTAEQHRKTGFDAGFQQGLAQTMPELMRVVNEYKSVIHQNLAVAVSGLEKELTAFFDDTKIRFQLIHQLLEQFAAESECELILPAELKKEMTEYPDFTVPVSFHFSRNIILRTGKKLLYLTPETFAREKITQINARVVPDSPADISGESL

Flanking regions ( +/- flanking 50bp)

CATCCGGCTTCCGCATCTGCCCGATTCACTTTTACCTTTGGTATTACATTATGTGCCGTTCACTGCCTGATTCCCTGCTGTCACATATCAGACACGGTGTGCTGATTAAAGATCGCCATGTCTCTGCCCTCTGCCGCCTCAGTAACCTGACCCGGCAGGCAAACCAGCACGCTGCCCGCCTGATAAAACAGGCGGAAGATACTGCAGAACAACATCGCAAAACCGGATTTGATGCCGGTTTTCAGCAGGGGCTGGCACAGACGATGCCGGAACTGATGCGTGTGGTGAATGAGTATAAATCTGTCATTCACCAAAACCTCGCCGTTGCAGTTTCCGGTCTGGAAAAAGAGCTGACTGCATTTTTTGATGATACAAAAATACGTTTTCAGCTGATTCATCAGTTGCTTGAACAGTTTGCCGCGGAGAGTGAATGTGAATTAATCCTGCCGGCTGAGCTTAAAAAAGAAATGACTGAATATCCGGATTTCACTGTACCGGTTTCTTTTCATTTCAGTCGTAACATCATATTACGTACCGGAAAAAAATTACTTTATCTGACACCGGAAACGTTTGCCCGTGAAAAAATAACACAAATAAATGCCCGTGTTGTTCCGGATAGCCCGGCGGATATCTCCGGTGAATCTTTATAATTATACAAAAAAGGACAATAAATATGAGAACAGAAATGACAGCCGGAAAG