Homologs in group_44

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13 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_05110 FBDBKF_05110 46.3 Morganella morganii S1 cysB HTH-type transcriptional regulator CysB
FBDBKF_10650 FBDBKF_10650 100.0 Morganella morganii S1 cysB DNA-binding transcriptional regulator, LysR family
EHELCC_12480 EHELCC_12480 46.3 Morganella morganii S2 cysB HTH-type transcriptional regulator CysB
EHELCC_14985 EHELCC_14985 100.0 Morganella morganii S2 cysB DNA-binding transcriptional regulator, LysR family
NLDBIP_12820 NLDBIP_12820 46.3 Morganella morganii S4 cysB HTH-type transcriptional regulator CysB
NLDBIP_14815 NLDBIP_14815 100.0 Morganella morganii S4 cysB DNA-binding transcriptional regulator, LysR family
LHKJJB_12680 LHKJJB_12680 46.3 Morganella morganii S3 cysB HTH-type transcriptional regulator CysB
LHKJJB_14530 LHKJJB_14530 100.0 Morganella morganii S3 cysB DNA-binding transcriptional regulator, LysR family
HKOGLL_11295 HKOGLL_11295 46.3 Morganella morganii S5 cysB HTH-type transcriptional regulator CysB
F4V73_RS05565 F4V73_RS05565 46.3 Morganella psychrotolerans cysB HTH-type transcriptional regulator CysB
F4V73_RS14360 F4V73_RS14360 94.5 Morganella psychrotolerans - LysR substrate-binding domain-containing protein
PMI_RS06380 PMI_RS06380 47.2 Proteus mirabilis HI4320 cysB HTH-type transcriptional regulator CysB
PMI_RS15975 PMI_RS15975 72.4 Proteus mirabilis HI4320 - LysR substrate-binding domain-containing protein

Distribution of the homologs in the orthogroup group_44

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_44

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P06614 1.62e-110 327 52 1 296 1 cysB HTH-type transcriptional regulator CysB Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P0A9F3 4.83e-110 325 51 1 296 3 cysB HTH-type transcriptional regulator CysB Escherichia coli (strain K12)
P0A9F4 4.83e-110 325 51 1 296 3 cysB HTH-type transcriptional regulator CysB Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0A9F5 4.83e-110 325 51 1 296 3 cysB HTH-type transcriptional regulator CysB Escherichia coli O157:H7
P45600 2.11e-109 324 50 1 296 1 cysB HTH-type transcriptional regulator CysB Klebsiella pneumoniae
P45105 1.86e-96 291 44 2 306 3 cysB HTH-type transcriptional regulator CysB Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
B4E8S9 1.65e-85 263 42 1 297 1 ssuR HTH-type transcriptional regulator SsuR Burkholderia cenocepacia (strain ATCC BAA-245 / DSM 16553 / LMG 16656 / NCTC 13227 / J2315 / CF5610)
B4E8V9 6.41e-82 253 40 1 303 1 cysB HTH-type transcriptional regulator CysB Burkholderia cenocepacia (strain ATCC BAA-245 / DSM 16553 / LMG 16656 / NCTC 13227 / J2315 / CF5610)
Q47083 1.27e-63 207 36 2 294 1 cbl HTH-type transcriptional regulator cbl Escherichia coli (strain K12)
Q08598 4.14e-59 195 35 2 310 3 cbl HTH-type transcriptional regulator cbl Klebsiella aerogenes
P52675 7.65e-28 108 41 0 136 3 cysB HTH-type transcriptional regulator CysB (Fragment) Thiocapsa roseopersicina
A0T0G2 5.1e-23 100 27 6 288 3 rbcR Probable RuBisCO transcriptional regulator Phaeodactylum tricornutum (strain CCAP 1055/1)
P20668 1e-22 99 27 2 248 1 gltC Transcriptional dual regulator GltC Bacillus subtilis (strain 168)
P49518 1.53e-22 99 27 5 270 3 rbcR Probable RuBisCO transcriptional regulator Trieres chinensis
O32255 1.11e-21 96 25 4 254 3 yvbU Uncharacterized HTH-type transcriptional regulator YvbU Bacillus subtilis (strain 168)
P39647 1.51e-21 95 27 4 281 1 cysL HTH-type transcriptional regulator CysL Bacillus subtilis (strain 168)
P37499 2e-21 95 25 3 243 3 yybE Uncharacterized HTH-type transcriptional regulator YybE Bacillus subtilis (strain 168)
P27111 6.46e-21 94 28 2 219 1 cynR HTH-type transcriptional regulator CynR Escherichia coli (strain K12)
Q8X4M5 6.86e-21 94 28 2 219 3 cynR HTH-type transcriptional regulator CynR Escherichia coli O157:H7
Q55459 9.23e-21 94 27 6 250 1 cmpR HTH-type transcriptional activator CmpR Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
P48271 2.54e-19 90 26 5 252 3 rbcR Probable RuBisCO transcriptional regulator Cyanophora paradoxa
P25544 3.87e-19 89 26 5 252 3 rbcR RuBisCO operon transcriptional regulator Allochromatium vinosum
Q5N5I5 3.67e-18 87 25 6 266 3 cmpR HTH-type transcriptional activator CmpR Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1)
Q9F1R2 3.67e-18 87 25 6 266 1 cmpR HTH-type transcriptional activator CmpR Synechococcus elongatus (strain ATCC 33912 / PCC 7942 / FACHB-805)
P71318 4.57e-18 86 23 6 308 3 oxyR Hydrogen peroxide-inducible genes activator Pectobacterium carotovorum subsp. carotovorum
Q3MCB5 1.16e-17 85 26 4 270 3 rbcR Probable RuBisCO transcriptional regulator Trichormus variabilis (strain ATCC 29413 / PCC 7937)
P73123 1.2e-17 85 26 4 268 3 rbcR Probable RuBisCO transcriptional regulator Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
O34701 1.44e-17 84 28 6 249 3 yoaU Uncharacterized HTH-type transcriptional regulator YoaU Bacillus subtilis (strain 168)
Q85G62 1.6e-17 84 26 4 266 3 rbcR Probable RuBisCO transcriptional regulator Cyanidioschyzon merolae (strain NIES-3377 / 10D)
P39592 2.05e-17 84 25 4 244 3 ywbI Uncharacterized HTH-type transcriptional regulator YwbI Bacillus subtilis (strain 168)
Q8YQ82 4.43e-17 84 27 7 277 3 rbcR Probable RuBisCO transcriptional regulator Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)
P94403 4.7e-17 83 25 7 271 3 bsdA HTH-type transcriptional regulator BsdA Bacillus subtilis (strain 168)
P0ACQ4 4.73e-17 83 25 7 286 1 oxyR DNA-binding transcriptional dual regulator OxyR Escherichia coli (strain K12)
P0ACQ5 4.73e-17 83 25 7 286 3 oxyR Hydrogen peroxide-inducible genes activator Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0ACQ6 4.73e-17 83 25 7 286 3 oxyR Hydrogen peroxide-inducible genes activator Escherichia coli O157:H7
Q9X725 9.28e-17 82 25 4 255 3 oxyR Hydrogen peroxide-inducible genes activator Dickeya chrysanthemi
P94387 1.29e-16 82 26 7 259 3 ycgK Uncharacterized HTH-type transcriptional regulator YcgK Bacillus subtilis (strain 168)
P52693 1.46e-16 82 25 6 258 3 ntcB Probable nitrogen assimilation transcriptional activator Synechococcus elongatus (strain ATCC 33912 / PCC 7942 / FACHB-805)
Q47141 1.85e-16 81 26 8 306 1 hcaR Hca operon transcriptional activator HcaR Escherichia coli (strain K12)
Q1XDT2 2.48e-16 81 26 5 252 3 rbcR Probable RuBisCO transcriptional regulator Neopyropia yezoensis
P44876 2.92e-16 81 22 5 292 3 HI_0775 Uncharacterized HTH-type transcriptional regulator HI_0775 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
O78432 3.45e-16 81 25 4 270 3 rbcR Probable RuBisCO transcriptional regulator Guillardia theta
P96725 4.26e-16 80 26 5 244 3 ywqM Uncharacterized HTH-type transcriptional regulator YwqM Bacillus subtilis (strain 168)
P51205 5.81e-16 80 26 5 252 3 rbcR Probable RuBisCO transcriptional regulator Porphyra purpurea
P42722 1.37e-15 79 25 4 244 3 cfxR HTH-type transcriptional regulator CfxR Cupriavidus necator (strain ATCC 17699 / DSM 428 / KCTC 22496 / NCIMB 10442 / H16 / Stanier 337)
P44821 3.79e-15 77 23 5 281 3 ilvY HTH-type transcriptional activator IlvY Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
O19892 4.9e-15 77 27 5 255 3 rbcR Probable RuBisCO transcriptional regulator Cyanidium caldarium
Q6B936 5.53e-15 77 26 5 251 3 rbcR Probable RuBisCO transcriptional regulator Gracilaria tenuistipitata var. liui
A2CI69 6.85e-15 77 24 3 245 3 rbcR Probable RuBisCO transcriptional regulator Chlorokybus atmophyticus
Q4G384 7.69e-15 77 24 4 253 3 rbcR Probable RuBisCO transcriptional regulator Emiliania huxleyi
O07906 2.25e-14 75 21 5 259 3 yraN Uncharacterized HTH-type transcriptional regulator YraN Bacillus subtilis (strain 168)
A0T0V5 2.65e-14 75 25 7 295 3 rbcR-A Probable RuBisCO transcriptional regulator Thalassiosira pseudonana
P74422 7.73e-14 74 25 3 224 3 ntcB Probable nitrogen assimilation transcriptional activator Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
O33812 2.14e-13 72 24 7 258 3 None Uncharacterized HTH-type transcriptional regulator in lacR 5'region (Fragment) Staphylococcus xylosus
P77744 4.65e-13 72 27 2 161 3 abgR HTH-type transcriptional regulator AbgR Escherichia coli (strain K12)
P0A2Q4 6.77e-13 71 26 9 234 3 metR HTH-type transcriptional regulator MetR Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P0A2Q5 6.77e-13 71 26 9 234 3 metR HTH-type transcriptional regulator MetR Salmonella typhi
P52696 7.44e-13 71 25 4 201 3 ybhD Uncharacterized HTH-type transcriptional regulator YbhD Escherichia coli (strain K12)
A7Z5E4 1.15e-12 70 25 8 255 3 yofA HTH-type transcriptional regulator YofA Bacillus velezensis (strain DSM 23117 / BGSC 10A6 / LMG 26770 / FZB42)
P71025 1.57e-12 70 27 7 235 3 czcR HTH-type transcriptional regulator CzcR Bacillus subtilis (strain 168)
Q04778 2.01e-12 70 23 6 254 3 alsR HTH-type transcriptional regulator AlsR Bacillus subtilis (strain 168)
P0ACR4 3.7e-12 69 25 5 244 1 yeiE Uncharacterized HTH-type transcriptional regulator YeiE Escherichia coli (strain K12)
P0ACR5 3.7e-12 69 25 5 244 3 yeiE Uncharacterized HTH-type transcriptional regulator YeiE Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0ACR6 3.7e-12 69 25 5 244 3 yeiE Uncharacterized HTH-type transcriptional regulator YeiE Escherichia coli O157:H7
O35038 3.79e-12 69 22 3 247 3 ytlI HTH-type transcriptional regulator YtlI Bacillus subtilis (strain 168)
O06703 5.05e-12 69 23 9 319 3 bbuR HTH-type transcriptional regulator BbuR Bordetella bronchiseptica (strain ATCC BAA-588 / NCTC 13252 / RB50)
P52691 6.91e-12 68 29 7 207 3 lrrA Probable HTH-type transcriptional regulator LrrA Synechococcus elongatus (strain ATCC 33912 / PCC 7942 / FACHB-805)
P44418 7.13e-12 68 23 4 248 3 oxyR Hydrogen peroxide-inducible genes activator Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P05827 9.07e-12 68 23 6 252 3 ilvY HTH-type transcriptional regulator IlvY Escherichia coli (strain K12)
P77559 9.69e-12 68 26 10 251 3 ynfL Uncharacterized HTH-type transcriptional regulator YnfL Escherichia coli (strain K12)
P03030 1.25e-11 67 25 6 277 3 lysR Transcriptional activator protein LysR Escherichia coli (strain K12)
P77309 1.68e-11 67 30 4 148 3 yneJ Uncharacterized HTH-type transcriptional regulator YneJ Escherichia coli (strain K12)
P0A9G1 2.14e-11 67 26 9 234 3 metR HTH-type transcriptional regulator MetR Shigella flexneri
P0A9F9 2.14e-11 67 26 9 234 1 metR HTH-type transcriptional regulator MetR Escherichia coli (strain K12)
P0A9G0 2.14e-11 67 26 9 234 3 metR HTH-type transcriptional regulator MetR Escherichia coli O157:H7
O68014 3.32e-11 66 25 5 181 1 benM HTH-type transcriptional regulator BenM Acinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1)
O34827 4.19e-11 66 20 5 265 3 ykuM Uncharacterized HTH-type transcriptional regulator YkuM Bacillus subtilis (strain 168)
O32186 8.69e-11 65 22 6 295 3 yusT Uncharacterized HTH-type transcriptional regulator YusT Bacillus subtilis (strain 168)
P0A2Q2 9.19e-11 65 23 6 252 3 ilvY HTH-type transcriptional activator IlvY Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P0A2Q3 9.19e-11 65 23 6 252 3 ilvY HTH-type transcriptional activator IlvY Salmonella typhi
Q9X5P2 1.15e-10 65 27 5 186 2 oxyR Probable hydrogen peroxide-inducible genes activator Streptomyces viridosporus
P94501 1.3e-10 64 22 5 264 1 gltR HTH-type transcriptional regulator GltR Bacillus subtilis (strain 168)
P0ACR8 2.74e-10 63 22 4 257 3 yfeR Uncharacterized HTH-type transcriptional regulator YfeR Shigella flexneri
P0ACR7 2.74e-10 63 22 4 257 3 yfeR Uncharacterized HTH-type transcriptional regulator YfeR Escherichia coli (strain K12)
P39127 2.95e-10 63 25 8 258 3 citR HTH-type transcriptional regulator CitR Bacillus subtilis (strain 168)
P0A4T7 3.98e-10 63 29 2 148 3 pcaQ HTH-type transcriptional regulator PcaQ Rhizobium radiobacter
P0A4T6 3.98e-10 63 29 2 148 3 pcaQ HTH-type transcriptional regulator PcaQ Agrobacterium fabrum (strain C58 / ATCC 33970)
Q765S2 5.2e-10 62 24 9 244 3 allS HTH-type transcriptional activator AllS Klebsiella pneumoniae
O33945 1.05e-09 62 23 5 199 3 None Probable cat1 operon transcriptional activator Acinetobacter lwoffii
P45349 2.83e-09 60 24 8 201 3 metR HTH-type transcriptional regulator MetR Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P24734 4.07e-09 60 32 9 175 1 ampR HTH-type transcriptional activator AmpR Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
P20667 4.72e-09 60 28 8 205 3 catR HTH-type transcriptional regulator CatR Pseudomonas putida
P07774 5.16e-09 60 28 3 148 1 catM HTH-type transcriptional regulator CatM Acinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1)
Q81IX0 6.19e-09 59 22 7 303 3 czcR HTH-type transcriptional regulator CzcR Bacillus cereus (strain ATCC 14579 / DSM 31 / CCUG 7414 / JCM 2152 / NBRC 15305 / NCIMB 9373 / NCTC 2599 / NRRL B-3711)
Q06610 6.73e-09 59 22 5 262 3 rbcR RuBisCO operon transcriptional regulator Acidithiobacillus ferrooxidans
P52665 8.79e-09 57 29 3 145 3 budR HTH-type transcriptional regulator BudR (Fragment) Klebsiella aerogenes
Q63H01 9.3e-09 59 22 7 303 3 czcR HTH-type transcriptional regulator CzcR Bacillus cereus (strain ZK / E33L)
Q73EY2 9.3e-09 59 22 7 303 3 czcR HTH-type transcriptional regulator CzcR Bacillus cereus (strain ATCC 10987 / NRS 248)
Q6HPH4 1.01e-08 58 22 7 303 3 czcR HTH-type transcriptional regulator CzcR Bacillus thuringiensis subsp. konkukian (strain 97-27)
O34685 1.02e-08 58 24 7 266 1 yofA HTH-type transcriptional regulator YofA Bacillus subtilis (strain 168)
A0R8S0 1.47e-08 58 22 7 303 3 czcR HTH-type transcriptional regulator CzcR Bacillus thuringiensis (strain Al Hakam)
Q81VJ1 1.88e-08 58 22 7 303 3 czcR HTH-type transcriptional regulator CzcR Bacillus anthracis
P52669 2.07e-08 58 21 4 250 3 ttuA HTH-type transcriptional regulator TtuA Agrobacterium vitis
Q9HWH8 2.1e-08 58 23 6 248 3 nmoR HTH-type transcriptional regulator NmoR Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
P70785 2.49e-08 58 24 2 195 3 ttuA HTH-type transcriptional regulator TtuA Agrobacterium vitis
P0A4T3 4.06e-08 57 24 5 201 1 occR Octopine catabolism/uptake operon regulatory protein OccR Rhizobium radiobacter
P0A4T4 4.06e-08 57 24 5 201 1 occR Octopine catabolism/uptake operon regulatory protein OccR Agrobacterium tumefaciens (strain Ach5)
P55181 4.31e-08 57 22 11 304 3 yxjO Uncharacterized HTH-type transcriptional regulator YxjO Bacillus subtilis (strain 168)
Q44311 4.46e-08 57 24 7 254 3 soxR HTH-type transcriptional regulator SoxR Arthrobacter sp. (strain TE1826)
P52666 1.26e-07 55 29 5 151 3 budR HTH-type transcriptional regulator BudR Raoultella terrigena
P30864 1.64e-07 55 34 4 124 3 yafC Uncharacterized HTH-type transcriptional regulator YafC Escherichia coli (strain K12)
P72294 1.82e-07 55 23 8 272 3 occR Octopine catabolism/uptake operon regulatory protein OccR Rhizobium meliloti
Q9S4Y7 2.53e-07 55 23 8 269 3 allS HTH-type transcriptional activator AllS Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q5PCH2 2.53e-07 55 23 8 269 3 allS HTH-type transcriptional activator AllS Salmonella paratyphi A (strain ATCC 9150 / SARB42)
P34818 2.81e-07 54 25 6 144 3 trpI HTH-type transcriptional regulator TrpI Pseudomonas syringae pv. syringae
Q57S50 2.92e-07 54 23 8 269 3 allS HTH-type transcriptional activator AllS Salmonella choleraesuis (strain SC-B67)
Q57748 3e-07 54 22 5 287 3 MJ0300 Uncharacterized HTH-type transcriptional regulator MJ0300 Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
P23841 3.94e-07 54 19 2 243 3 xapR HTH-type transcriptional regulator XapR Escherichia coli (strain K12)
Q9JPU9 4.63e-07 54 33 4 127 1 crgA HTH-type transcriptional regulator CrgA Neisseria meningitidis serogroup C (strain 8013)
Q00678 6.24e-07 53 23 8 258 3 nocR Regulatory protein NocR Agrobacterium fabrum (strain C58 / ATCC 33970)
Q8Z8R3 6.36e-07 53 23 8 269 3 allS HTH-type transcriptional activator AllS Salmonella typhi
A1JI47 6.97e-07 53 28 3 150 3 hdfR HTH-type transcriptional regulator HdfR Yersinia enterocolitica serotype O:8 / biotype 1B (strain NCTC 13174 / 8081)
P35112 7.02e-07 53 23 8 255 3 nocR Regulatory protein NocR Agrobacterium tumefaciens (strain T37)
P25545 9.71e-07 53 24 10 273 3 cbbR HTH-type transcriptional regulator CbbR Xanthobacter flavus
Q8KA72 1.21e-06 52 23 7 206 3 metR HTH-type transcriptional regulator MetR Buchnera aphidicola subsp. Schizaphis graminum (strain Sg)
Q1RF30 1.3e-06 52 23 10 246 3 allS HTH-type transcriptional activator AllS Escherichia coli (strain UTI89 / UPEC)
A1A8H0 1.3e-06 52 23 10 246 3 allS HTH-type transcriptional activator AllS Escherichia coli O1:K1 / APEC
Q47005 1.34e-06 52 24 7 252 3 nac Nitrogen assimilation regulatory protein nac Escherichia coli (strain K12)
Q8FK66 1.34e-06 52 23 10 246 3 allS HTH-type transcriptional activator AllS Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Q0TKD7 1.34e-06 52 23 10 246 3 allS HTH-type transcriptional activator AllS Escherichia coli O6:K15:H31 (strain 536 / UPEC)
P52677 1.63e-06 52 24 3 183 3 oxyR Probable hydrogen peroxide-inducible genes activator Mycobacterium avium
P0ACR0 1.79e-06 52 22 8 243 1 allS HTH-type transcriptional activator AllS Escherichia coli (strain K12)
P0ACR1 1.79e-06 52 22 8 243 3 allS HTH-type transcriptional activator AllS Escherichia coli O157:H7
P42427 2.19e-06 51 25 5 170 3 tfdT HTH-type transcriptional regulator TfdT Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197)
Q88JX7 2.19e-06 52 24 6 247 3 galR HTH-type transcriptional regulator GalR Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440)
A4QH19 2.57e-06 52 22 8 285 1 shiR HTH-type transcriptional regulator ShiR Corynebacterium glutamicum (strain R)
Q1R4H3 2.85e-06 51 28 6 157 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli (strain UTI89 / UPEC)
P59369 2.85e-06 51 28 6 157 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Q0TAV4 2.85e-06 51 28 6 157 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O6:K15:H31 (strain 536 / UPEC)
B7N260 2.85e-06 51 28 6 157 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O81 (strain ED1a)
B7MGH6 2.85e-06 51 28 6 157 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O45:K1 (strain S88 / ExPEC)
B4TNR5 3.08e-06 51 29 6 155 3 hdfR HTH-type transcriptional regulator HdfR Salmonella schwarzengrund (strain CVM19633)
Q9JXW7 3.09e-06 51 32 4 127 1 crgA HTH-type transcriptional regulator CrgA Neisseria meningitidis serogroup B (strain ATCC BAA-335 / MC58)
B5FN59 3.28e-06 51 29 6 155 3 hdfR HTH-type transcriptional regulator HdfR Salmonella dublin (strain CT_02021853)
B7LUJ5 3.48e-06 51 34 2 86 3 hdfR HTH-type transcriptional regulator HdfR Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CCUG 18766 / IAM 14443 / JCM 21226 / LMG 7866 / NBRC 102419 / NCTC 12128 / CDC 0568-73)
B4SYF7 3.5e-06 51 29 6 155 3 hdfR HTH-type transcriptional regulator HdfR Salmonella newport (strain SL254)
P52658 3.6e-06 51 28 8 170 3 ampR HTH-type transcriptional activator AmpR Citrobacter koseri
P0A2Q0 3.66e-06 51 29 6 155 3 hdfR HTH-type transcriptional regulator HdfR Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P0A2Q1 3.66e-06 51 29 6 155 3 hdfR HTH-type transcriptional regulator HdfR Salmonella typhi
B5BIR0 3.66e-06 51 29 6 155 3 hdfR HTH-type transcriptional regulator HdfR Salmonella paratyphi A (strain AKU_12601)
C0Q2U0 3.66e-06 51 29 6 155 3 hdfR HTH-type transcriptional regulator HdfR Salmonella paratyphi C (strain RKS4594)
A9MXD5 3.66e-06 51 29 6 155 3 hdfR HTH-type transcriptional regulator HdfR Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7)
Q5PJZ0 3.66e-06 51 29 6 155 3 hdfR HTH-type transcriptional regulator HdfR Salmonella paratyphi A (strain ATCC 9150 / SARB42)
B4TAZ8 3.66e-06 51 29 6 155 3 hdfR HTH-type transcriptional regulator HdfR Salmonella heidelberg (strain SL476)
B5EZ22 3.66e-06 51 29 6 155 3 hdfR HTH-type transcriptional regulator HdfR Salmonella agona (strain SL483)
Q3YVK2 4.18e-06 51 34 2 86 3 hdfR HTH-type transcriptional regulator HdfR Shigella sonnei (strain Ss046)
P0A8S0 4.18e-06 51 34 2 86 3 hdfR HTH-type transcriptional regulator HdfR Shigella flexneri
Q0SYV7 4.18e-06 51 34 2 86 3 hdfR HTH-type transcriptional regulator HdfR Shigella flexneri serotype 5b (strain 8401)
Q31UM0 4.18e-06 51 34 2 86 3 hdfR HTH-type transcriptional regulator HdfR Shigella boydii serotype 4 (strain Sb227)
B1LLU0 4.18e-06 51 34 2 86 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli (strain SMS-3-5 / SECEC)
P0A8R9 4.18e-06 51 34 2 86 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli (strain K12)
B1IWY2 4.18e-06 51 34 2 86 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli (strain ATCC 8739 / DSM 1576 / NBRC 3972 / NCIMB 8545 / WDCM 00012 / Crooks)
A8A6M0 4.18e-06 51 34 2 86 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O9:H4 (strain HS)
B1X9Y2 4.18e-06 51 34 2 86 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli (strain K12 / DH10B)
C4ZZ35 4.18e-06 51 34 2 86 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli (strain K12 / MC4100 / BW2952)
B7NU32 4.18e-06 51 34 2 86 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O7:K1 (strain IAI39 / ExPEC)
B7UMM1 4.18e-06 51 34 2 86 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O127:H6 (strain E2348/69 / EPEC)
Q329U3 4.22e-06 51 34 2 86 3 hdfR HTH-type transcriptional regulator HdfR Shigella dysenteriae serotype 1 (strain Sd197)
B6I4A0 4.22e-06 51 34 2 86 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli (strain SE11)
B7M5B2 4.22e-06 51 34 2 86 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O8 (strain IAI1)
B5YY14 4.22e-06 51 34 2 86 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O157:H7 (strain EC4115 / EHEC)
Q8XAW1 4.22e-06 51 34 2 86 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O157:H7
B7L8A6 4.22e-06 51 34 2 86 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli (strain 55989 / EAEC)
A7ZTW7 4.22e-06 51 34 2 86 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O139:H28 (strain E24377A / ETEC)
B7NF72 4.26e-06 51 34 2 86 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC)
P52667 4.82e-06 51 23 1 140 3 estR HTH-type transcriptional regulator EstR Acinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1)
P0A9F6 5.72e-06 50 30 7 147 1 gcvA Glycine cleavage system transcriptional activator Escherichia coli (strain K12)
P0A9F7 5.72e-06 50 30 7 147 3 gcvA Glycine cleavage system transcriptional activator Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0A9F8 5.72e-06 50 30 7 147 3 gcvA Glycine cleavage system transcriptional activator Escherichia coli O157:H7
P52595 5.97e-06 50 22 6 251 3 cbbR HTH-type transcriptional regulator CbbR Rhodospirillum rubrum
P45099 6.33e-06 50 30 5 145 3 gcvA Glycine cleavage system transcriptional activator homolog Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
B2TU26 7.24e-06 50 34 2 86 3 hdfR HTH-type transcriptional regulator HdfR Shigella boydii serotype 18 (strain CDC 3083-94 / BS512)
P0ACQ9 7.64e-06 50 24 3 158 3 tdcA HTH-type transcriptional regulator TdcA Shigella flexneri
P0ACQ7 7.64e-06 50 24 3 158 3 tdcA HTH-type transcriptional regulator TdcA Escherichia coli (strain K12)
P0ACQ8 7.64e-06 50 24 3 158 3 tdcA HTH-type transcriptional regulator TdcA Escherichia coli O157:H7
P77171 7.85e-06 50 24 5 212 3 ydcI Uncharacterized HTH-type transcriptional regulator YdcI Escherichia coli (strain K12)
P10183 8.05e-06 50 22 6 212 3 nahR HTH-type transcriptional activator NahR Pseudomonas putida
B1JQ39 1.07e-05 50 28 3 150 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pseudotuberculosis serotype O:3 (strain YPIII)
Q66G51 1.07e-05 50 28 3 150 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pseudotuberculosis serotype I (strain IP32953)
A4TRF4 1.07e-05 50 28 3 150 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pestis (strain Pestoides F)
Q1CNN4 1.07e-05 50 28 3 150 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pestis bv. Antiqua (strain Nepal516)
A9R8E7 1.07e-05 50 28 3 150 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pestis bv. Antiqua (strain Angola)
Q8ZAA7 1.07e-05 50 28 3 150 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pestis
B2JZG4 1.07e-05 50 28 3 150 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pseudotuberculosis serotype IB (strain PB1/+)
Q1CBT5 1.07e-05 50 28 3 150 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pestis bv. Antiqua (strain Antiqua)
A7FD20 1.07e-05 50 28 3 150 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pseudotuberculosis serotype O:1b (strain IP 31758)
A0A0H2ZDG9 1.22e-05 50 28 2 125 3 PA14_22550 HTH-type transcriptional repressor PA14_22550 Pseudomonas aeruginosa (strain UCBPP-PA14)
Q1R6S1 1.5e-05 49 27 2 122 3 ttdR HTH-type transcriptional activator TtdR Escherichia coli (strain UTI89 / UPEC)
Q8FDH0 1.5e-05 49 27 2 122 3 ttdR HTH-type transcriptional activator TtdR Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Q0TD46 1.54e-05 49 27 2 122 3 ttdR HTH-type transcriptional activator TtdR Escherichia coli O6:K15:H31 (strain 536 / UPEC)
P45463 1.59e-05 49 27 2 122 3 ttdR HTH-type transcriptional activator TtdR Escherichia coli (strain K12)
O87883 2.55e-05 47 23 3 183 3 oxyR Probable hydrogen peroxide-inducible genes activator (Fragment) Mycobacterium xenopi
Q05840 2.82e-05 48 23 10 298 3 clcR HTH-type transcriptional regulator ClcR Pseudomonas putida
P16931 2.98e-05 48 25 3 147 3 dgdR HTH-type transcriptional regulator DgdR Burkholderia cepacia
P52684 3.67e-05 48 21 4 235 3 mauR Malonate utilization transcriptional regulator Klebsiella pneumoniae
P96194 3.9e-05 46 27 2 101 3 None Uncharacterized HTH-type transcriptional regulator in ibpB-leuC intergenic region Azotobacter vinelandii
P56885 4.39e-05 48 23 9 261 3 cbbR HTH-type transcriptional regulator CbbR Sinorhizobium medicae (strain WSM419)
Q8XBK9 7.95e-05 47 26 2 122 3 ttdR HTH-type transcriptional activator TtdR Escherichia coli O157:H7
P94678 8.27e-05 47 22 4 190 1 tsaR HTH-type transcriptional regulator TsaR Comamonas testosteroni
P52690 9.19e-05 47 22 11 287 3 cbbR HTH-type transcriptional regulator CbbR Cereibacter sphaeroides
P33634 0.000126 46 25 3 122 3 yfiE Uncharacterized HTH-type transcriptional regulator YfiE Escherichia coli (strain K12)
Q9EXL7 0.000142 46 24 4 152 3 nagR HTH-type transcriptional activator NagR Ralstonia sp.
P67662 0.000272 45 24 4 151 3 aaeR HTH-type transcriptional activator AaeR Escherichia coli (strain K12)
P67663 0.000272 45 24 4 151 3 aaeR HTH-type transcriptional activator AaeR Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P67664 0.000272 45 24 4 151 3 aaeR HTH-type transcriptional activator AaeR Escherichia coli O157:H7
P52660 0.000282 45 27 9 185 3 blaA HTH-type transcriptional regulator BlaA Proteus vulgaris
O87324 0.000289 45 23 3 178 3 oxyR Probable hydrogen peroxide-inducible genes activator Mycobacterium marinum
Q08597 0.000422 45 25 5 152 3 nac Nitrogen assimilation regulatory protein nac Klebsiella aerogenes
P55733 0.00048 45 26 7 175 3 syrM2 HTH-type transcriptional regulator SyrM 2 Sinorhizobium fredii (strain NBRC 101917 / NGR234)
P16400 0.000638 44 23 10 256 3 mleR Malolactic fermentation system transcriptional activator Lactococcus lactis subsp. lactis (strain IL1403)
P52044 0.000775 44 26 7 141 3 ygfI Uncharacterized HTH-type transcriptional regulator YgfI Escherichia coli (strain K12)
P0DUU5 0.000845 44 22 6 197 1 aceR HTH-type transcriptional regulator AceR Acinetobacter baumannii (strain ATCC 17978 / DSM 105126 / CIP 53.77 / LMG 1025 / NCDC KC755 / 5377)

  • Number of RefSeq hits:

General

Source Morganella morganii S5
Locus tag HKOGLL_13150
Feature type CDS
Gene cysB
Product DNA-binding transcriptional regulator, LysR family
Location 45053 - 46030 (strand: -1)
Length 978 (nucleotides) / 325 (amino acids)

Contig

Accession ZDB_691
Length 141725 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_44
Orthogroup size 14
N. genomes 7

Actions

Genomic region

Domains

PF00126 Bacterial regulatory helix-turn-helix protein, lysR family
PF03466 LysR substrate binding domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0583 Transcription (K) K DNA-binding transcriptional regulator, LysR family

Protein Sequence

MNINQLKSFVEVVRSDFNITNAAEKLYTSQPTVSKQLKILEDELNVSLFNRKNNNLLSLSPIGEEVHRVACDILAQFDKIKSLVSHEDTTTKQNLRIATTHTQIRYKLPKVIERFNARYPNISLHFHQGAPAQLAEMVKNGDVDFAIATESLHLYDDLLTLPCYQWSRSAIVPHDHPLAQNEQLTIQELAHYPLITYVFGFTGRSKLDQVFYQNHLTPNVVLTAVDTEIIKFYVKRGAGVGVISTVAFDPAEDSDSLRCINIGNLVKPSYTHICISRHTHLKDYMYDFISCYAPHLDLNYIHQPEQWLPVDPKARDRLYRALPEL

Flanking regions ( +/- flanking 50bp)

ATTAATAATTTTAATATTTTGAATCCGTTTTATAACTGGATAAATAAGCAATGAACATTAATCAGCTCAAAAGTTTTGTTGAGGTGGTCAGGAGTGACTTTAATATCACGAATGCCGCCGAGAAGCTGTATACCTCGCAGCCGACAGTGAGCAAGCAGCTTAAAATTCTTGAAGATGAACTGAACGTTTCTTTATTCAACCGGAAAAATAATAACTTATTATCGCTCAGTCCGATTGGTGAAGAAGTTCATCGTGTTGCCTGCGATATTCTGGCGCAGTTTGATAAAATTAAAAGTCTGGTGTCACACGAAGATACCACGACAAAACAGAATCTCCGTATTGCCACCACCCACACGCAAATCCGTTATAAATTACCGAAAGTGATTGAACGCTTTAATGCGCGTTACCCGAACATTTCGCTGCATTTCCATCAGGGTGCTCCGGCACAGCTGGCGGAAATGGTGAAAAACGGGGATGTGGATTTTGCAATCGCCACCGAATCCCTGCATCTGTATGACGATTTACTGACACTGCCGTGCTATCAGTGGTCCCGCAGTGCGATTGTACCGCACGATCACCCGCTGGCACAGAATGAGCAGCTGACGATTCAGGAGCTGGCTCATTATCCGCTGATCACCTATGTATTCGGATTCACCGGCCGTTCCAAGCTGGATCAGGTATTTTATCAGAACCACCTGACGCCGAATGTGGTATTAACCGCGGTCGATACGGAAATTATTAAATTCTATGTGAAGCGCGGAGCGGGTGTCGGTGTTATTTCTACCGTGGCGTTTGATCCGGCGGAAGACAGTGACTCACTGCGCTGTATTAATATCGGTAATCTGGTGAAACCGAGCTATACCCATATTTGTATCAGCCGTCATACACATCTGAAGGATTATATGTATGACTTTATTTCCTGTTATGCGCCGCATCTTGACCTGAATTATATTCACCAGCCGGAACAGTGGCTGCCGGTTGATCCTAAAGCCCGTGACCGGCTTTACCGCGCATTGCCTGAGCTCTGATTCCTTTGTATTCCGGATAAAAAAAGCCCGGTAACGTCTGTTACCGAGCT