Homologs in group_2690

Help

5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_05470 FBDBKF_05470 100.0 Morganella morganii S1 menH 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxy late synthase MenH and related esterases, alpha/beta hydrolase fold
EHELCC_12120 EHELCC_12120 100.0 Morganella morganii S2 menH 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxy late synthase MenH and related esterases, alpha/beta hydrolase fold
NLDBIP_12460 NLDBIP_12460 100.0 Morganella morganii S4 menH 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxy late synthase MenH and related esterases, alpha/beta hydrolase fold
LHKJJB_12320 LHKJJB_12320 100.0 Morganella morganii S3 menH 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxy late synthase MenH and related esterases, alpha/beta hydrolase fold
PMI_RS03960 PMI_RS03960 55.4 Proteus mirabilis HI4320 - alpha/beta hydrolase

Distribution of the homologs in the orthogroup group_2690

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_2690

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
O52866 0.000334 45 27 11 240 1 None Soluble epoxide hydrolase Corynebacterium sp. (strain C12)

  • Number of RefSeq hits:

General

Source Morganella morganii S5
Locus tag HKOGLL_10935
Feature type CDS
Gene menH
Product 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxy late synthase MenH and related esterases, alpha/beta hydrolase fold
Location 75880 - 76740 (strand: -1)
Length 861 (nucleotides) / 286 (amino acids)

Contig

Accession ZDB_688
Length 181491 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2690
Orthogroup size 6
N. genomes 6

Actions

Genomic region

Domains

PF00561 alpha/beta hydrolase fold

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0596 Coenzyme transport and metabolism (H)
General function prediction only (R)		 HR 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, alpha/beta hydrolase fold

Protein Sequence

MNIKNQRKNITLLPDGRRFSWYDSGPETGIPVVFCTGAGMSGSAGFGIPYLADNNIRLITPDRPGLGNSSPDAGKSPESFAADVTFLMQSLGYTRFRAAGFSQGAVYAMALAYYAQVSALALISGQDQFDYPPTRALLSADIIDMQKNARTQPDGFTSWVRENITADWLMSFILNYSGETDLAVYQAADFLPAYRQCMTEAFSQGNEGYTQDLLIAMQEWGFTPEQITCPVSLWYGEKDTSTVHSPDGGKILAGRFPRAEHHLFAEEGGSLLWTQSQAILQALARA

Flanking regions ( +/- flanking 50bp)

AAAACCCCTCTTCTTTTTTATGCCTTCCGGCATATTTTCCGGTAATAACGATGAATATTAAAAACCAACGTAAAAACATCACCCTCTTACCCGACGGCCGCCGCTTCAGTTGGTATGACTCCGGCCCTGAGACCGGTATTCCGGTTGTGTTCTGTACTGGTGCAGGCATGAGTGGCTCTGCCGGCTTCGGTATTCCTTACCTGGCAGACAATAATATCCGGCTGATCACACCGGATCGCCCCGGGCTCGGTAATTCTTCTCCCGATGCCGGAAAATCACCGGAATCCTTTGCCGCTGATGTCACTTTTCTGATGCAGTCGCTGGGTTACACCCGGTTCAGAGCAGCCGGATTCTCTCAGGGTGCGGTTTATGCCATGGCACTGGCCTATTATGCGCAAGTTTCCGCGCTGGCACTGATTTCCGGGCAGGATCAGTTCGATTACCCGCCAACCCGGGCGCTGTTATCTGCTGATATCATTGATATGCAGAAGAACGCACGGACTCAGCCTGACGGGTTTACCTCATGGGTACGGGAAAATATCACCGCAGACTGGCTGATGAGTTTCATTCTGAACTACAGCGGGGAAACAGACCTGGCAGTTTATCAGGCGGCAGATTTTTTACCCGCTTACCGGCAGTGTATGACAGAGGCATTTTCTCAGGGAAATGAAGGCTATACACAGGATCTGCTGATTGCCATGCAGGAATGGGGATTTACACCGGAGCAAATTACCTGTCCGGTGTCACTGTGGTACGGGGAAAAGGACACCAGTACCGTGCACTCCCCGGATGGCGGCAAAATCCTGGCGGGACGCTTTCCCCGCGCGGAGCATCATCTGTTTGCGGAAGAAGGTGGCTCCCTGCTCTGGACACAGTCACAGGCGATATTACAGGCACTGGCCCGCGCATAACAAAAAACCGGCTCTGCGCCGGTTTTTCATCATATACAGTCTGTGTTACT