Homologs in group_1077

Help

6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_06110 FBDBKF_06110 100.0 Morganella morganii S1 csdE cysteine desulfurase sulfur acceptor subunit CsdE
EHELCC_09155 EHELCC_09155 100.0 Morganella morganii S2 csdE cysteine desulfurase sulfur acceptor subunit CsdE
NLDBIP_09535 NLDBIP_09535 100.0 Morganella morganii S4 csdE cysteine desulfurase sulfur acceptor subunit CsdE
LHKJJB_08220 LHKJJB_08220 100.0 Morganella morganii S3 csdE cysteine desulfurase sulfur acceptor subunit CsdE
F4V73_RS15805 F4V73_RS15805 78.4 Morganella psychrotolerans csdE cysteine desulfurase sulfur acceptor subunit CsdE
PMI_RS11375 PMI_RS11375 49.7 Proteus mirabilis HI4320 csdE cysteine desulfurase sulfur acceptor subunit CsdE

Distribution of the homologs in the orthogroup group_1077

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_1077

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0AGF2 3.25e-46 150 53 0 134 1 csdE Sulfur acceptor protein CsdE Escherichia coli (strain K12)
P0AGF3 3.25e-46 150 53 0 134 3 csdE Sulfur acceptor protein CsdE Escherichia coli O157:H7
B1JJ49 1.43e-27 102 39 0 133 3 sufE Cysteine desulfuration protein SufE Yersinia pseudotuberculosis serotype O:3 (strain YPIII)
Q66A23 1.43e-27 102 39 0 133 3 sufE Cysteine desulfuration protein SufE Yersinia pseudotuberculosis serotype I (strain IP32953)
A4TIP3 1.43e-27 102 39 0 133 3 sufE Cysteine desulfuration protein SufE Yersinia pestis (strain Pestoides F)
Q1CIJ7 1.43e-27 102 39 0 133 3 sufE Cysteine desulfuration protein SufE Yersinia pestis bv. Antiqua (strain Nepal516)
A9QZC8 1.43e-27 102 39 0 133 3 sufE Cysteine desulfuration protein SufE Yersinia pestis bv. Antiqua (strain Angola)
Q74TH2 1.43e-27 102 39 0 133 3 sufE Cysteine desulfuration protein SufE Yersinia pestis
B2K5J3 1.43e-27 102 39 0 133 3 sufE Cysteine desulfuration protein SufE Yersinia pseudotuberculosis serotype IB (strain PB1/+)
Q1C762 1.43e-27 102 39 0 133 3 sufE Cysteine desulfuration protein SufE Yersinia pestis bv. Antiqua (strain Antiqua)
A7FHJ3 3.89e-27 101 39 0 133 3 sufE Cysteine desulfuration protein SufE Yersinia pseudotuberculosis serotype O:1b (strain IP 31758)
A1JPC1 6.84e-27 100 36 0 133 3 sufE Cysteine desulfuration protein SufE Yersinia enterocolitica serotype O:8 / biotype 1B (strain NCTC 13174 / 8081)
Q2NT14 4.87e-26 98 34 0 126 3 sufE Cysteine desulfuration protein SufE Sodalis glossinidius (strain morsitans)
A4W9R4 1.11e-25 97 34 0 132 3 sufE Cysteine desulfuration protein SufE Enterobacter sp. (strain 638)
A8AH79 5.23e-25 95 34 0 132 3 sufE Cysteine desulfuration protein SufE Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696)
Q8Z6K0 3.19e-24 94 33 0 132 3 sufE Cysteine desulfuration protein SufE Salmonella typhi
B4TUT6 3.19e-24 94 33 0 132 3 sufE Cysteine desulfuration protein SufE Salmonella schwarzengrund (strain CVM19633)
B5BA16 3.19e-24 94 33 0 132 3 sufE Cysteine desulfuration protein SufE Salmonella paratyphi A (strain AKU_12601)
A9N141 3.19e-24 94 33 0 132 3 sufE Cysteine desulfuration protein SufE Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7)
Q5PH69 3.19e-24 94 33 0 132 3 sufE Cysteine desulfuration protein SufE Salmonella paratyphi A (strain ATCC 9150 / SARB42)
B5F7C3 3.19e-24 94 33 0 132 3 sufE Cysteine desulfuration protein SufE Salmonella agona (strain SL483)
Q8ZPQ1 3.55e-24 94 33 0 132 1 sufE Cysteine desulfuration protein SufE Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
B4T4R7 3.55e-24 94 33 0 132 3 sufE Cysteine desulfuration protein SufE Salmonella newport (strain SL254)
B4TGL0 3.55e-24 94 33 0 132 3 sufE Cysteine desulfuration protein SufE Salmonella heidelberg (strain SL476)
B5RAT3 3.55e-24 94 33 0 132 3 sufE Cysteine desulfuration protein SufE Salmonella gallinarum (strain 287/91 / NCTC 13346)
B5QVS8 3.55e-24 94 33 0 132 3 sufE Cysteine desulfuration protein SufE Salmonella enteritidis PT4 (strain P125109)
B5FIM2 3.55e-24 94 33 0 132 3 sufE Cysteine desulfuration protein SufE Salmonella dublin (strain CT_02021853)
Q57PR1 4.18e-24 93 33 0 132 3 sufE Cysteine desulfuration protein SufE Salmonella choleraesuis (strain SC-B67)
Q321D8 8.73e-24 92 34 0 120 3 sufE Cysteine desulfuration protein SufE Shigella boydii serotype 4 (strain Sb227)
B2U2I3 8.73e-24 92 34 0 120 3 sufE Cysteine desulfuration protein SufE Shigella boydii serotype 18 (strain CDC 3083-94 / BS512)
Q6D624 1.52e-23 92 36 0 127 3 sufE Cysteine desulfuration protein SufE Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672)
A9MEP2 1.53e-23 92 33 0 132 3 sufE Cysteine desulfuration protein SufE Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980)
Q0THF0 2.1e-23 92 34 0 120 3 sufE Cysteine desulfuration protein SufE Escherichia coli O6:K15:H31 (strain 536 / UPEC)
B5XQH3 2.96e-23 91 34 0 132 3 sufE Cysteine desulfuration protein SufE Klebsiella pneumoniae (strain 342)
C6DKM5 3.1e-23 91 34 0 125 3 sufE Cysteine desulfuration protein SufE Pectobacterium carotovorum subsp. carotovorum (strain PC1)
Q8FH55 3.13e-23 91 34 0 120 3 sufE Cysteine desulfuration protein SufE Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
B7MVF5 3.13e-23 91 34 0 120 3 sufE Cysteine desulfuration protein SufE Escherichia coli O81 (strain ED1a)
B7US18 3.13e-23 91 34 0 120 3 sufE Cysteine desulfuration protein SufE Escherichia coli O127:H6 (strain E2348/69 / EPEC)
Q1RBB7 3.2e-23 91 34 0 120 3 sufE Cysteine desulfuration protein SufE Escherichia coli (strain UTI89 / UPEC)
A1ABL7 3.2e-23 91 34 0 120 3 sufE Cysteine desulfuration protein SufE Escherichia coli O1:K1 / APEC
B7MA31 3.2e-23 91 34 0 120 3 sufE Cysteine desulfuration protein SufE Escherichia coli O45:K1 (strain S88 / ExPEC)
Q7N3U6 4.52e-23 91 34 0 124 3 sufE Cysteine desulfuration protein SufE Photorhabdus laumondii subsp. laumondii (strain DSM 15139 / CIP 105565 / TT01)
B7N515 6.74e-23 90 33 0 120 3 sufE Cysteine desulfuration protein SufE Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC)
B7LQ97 7.68e-23 90 32 0 120 3 sufE Cysteine desulfuration protein SufE Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CCUG 18766 / IAM 14443 / JCM 21226 / LMG 7866 / NBRC 102419 / NCTC 12128 / CDC 0568-73)
B6IBB8 7.85e-23 90 33 0 120 3 sufE Cysteine desulfuration protein SufE Escherichia coli (strain SE11)
B7M0N4 7.85e-23 90 33 0 120 3 sufE Cysteine desulfuration protein SufE Escherichia coli O8 (strain IAI1)
A7ZME4 7.85e-23 90 33 0 120 3 sufE Cysteine desulfuration protein SufE Escherichia coli O139:H28 (strain E24377A / ETEC)
B1LE57 8.46e-23 90 33 0 120 3 sufE Cysteine desulfuration protein SufE Escherichia coli (strain SMS-3-5 / SECEC)
P76194 8.46e-23 90 33 0 120 1 sufE Cysteine desulfuration protein SufE Escherichia coli (strain K12)
B1IQ77 8.46e-23 90 33 0 120 3 sufE Cysteine desulfuration protein SufE Escherichia coli (strain ATCC 8739 / DSM 1576 / NBRC 3972 / NCIMB 8545 / WDCM 00012 / Crooks)
A8A0M5 8.46e-23 90 33 0 120 3 sufE Cysteine desulfuration protein SufE Escherichia coli O9:H4 (strain HS)
B1XFY7 8.46e-23 90 33 0 120 3 sufE Cysteine desulfuration protein SufE Escherichia coli (strain K12 / DH10B)
C4ZYE1 8.46e-23 90 33 0 120 3 sufE Cysteine desulfuration protein SufE Escherichia coli (strain K12 / MC4100 / BW2952)
B7NTV7 8.46e-23 90 33 0 120 3 sufE Cysteine desulfuration protein SufE Escherichia coli O7:K1 (strain IAI39 / ExPEC)
B7L5N1 8.46e-23 90 33 0 120 3 sufE Cysteine desulfuration protein SufE Escherichia coli (strain 55989 / EAEC)
A6TAE3 1.15e-22 90 34 0 132 3 sufE Cysteine desulfuration protein SufE Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578)
B5Z4B2 1.16e-22 90 33 0 120 3 sufE Cysteine desulfuration protein SufE Escherichia coli O157:H7 (strain EC4115 / EHEC)
Q7ADI5 1.16e-22 90 33 0 120 3 sufE Cysteine desulfuration protein SufE Escherichia coli O157:H7
Q7C1E6 3.89e-22 88 33 0 120 3 sufE Cysteine desulfuration protein SufE Shigella flexneri
Q0T494 3.89e-22 88 33 0 120 3 sufE Cysteine desulfuration protein SufE Shigella flexneri serotype 5b (strain 8401)
Q32F89 5.43e-22 88 32 0 120 3 sufE Cysteine desulfuration protein SufE Shigella dysenteriae serotype 1 (strain Sd197)
Q3Z232 9.94e-22 87 33 0 120 3 sufE Cysteine desulfuration protein SufE Shigella sonnei (strain Ss046)
A7MF58 1.78e-21 87 32 0 132 3 sufE Cysteine desulfuration protein SufE Cronobacter sakazakii (strain ATCC BAA-894)
Q8D2J8 1.65e-20 84 29 0 122 3 sufE Cysteine desulfuration protein SufE Wigglesworthia glossinidia brevipalpis
Q9EXP1 4.16e-20 83 31 0 127 1 sufE Cysteine desulfuration protein SufE Dickeya dadantii (strain 3937)
Q52742 3.08e-19 81 31 1 131 3 RHE_CH01250 Uncharacterized SufE-like protein RHE_CH01250 Rhizobium etli (strain ATCC 51251 / DSM 11541 / JCM 21823 / NBRC 15573 / CFN 42)
Q52967 8.36e-19 80 31 1 123 3 R01000 Uncharacterized SufE-like protein R01000 Rhizobium meliloti (strain 1021)
P44156 2.49e-16 73 29 0 117 3 HI_1293 Uncharacterized SufE-like protein HI_1293 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P74523 5.67e-13 65 30 3 130 3 slr1419 Uncharacterized SufE-like protein slr1419 Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
Q9FGS4 8.95e-10 59 29 0 91 1 QS Quinolinate synthase, chloroplastic Arabidopsis thaliana
Q84W65 1.93e-08 55 27 3 122 1 SUFE1 SufE-like protein 1, chloroplastic/mitochondrial Arabidopsis thaliana
A0A1S4CB73 1.74e-07 52 30 3 116 3 QS Quinolinate synthase, chloroplastic Nicotiana tabacum
A0A2K8FTP3 3.12e-07 51 26 3 115 2 SufE Cysteine desulfuration protein SufE Plasmodium vivax
A0A509AER3 3.34e-07 51 23 4 135 1 SufE Putative cysteine desulfuration protein SufE Plasmodium berghei (strain Anka)
A0A1S4BZI5 1.64e-06 49 30 3 104 3 QS Quinolinate synthase, chloroplastic Nicotiana tabacum
O96155 2.39e-05 45 20 2 116 1 SufE Cysteine desulfuration protein SufE Plasmodium falciparum (isolate 3D7)
Q9FXE3 9.16e-05 44 29 1 85 2 SUFE2 SufE-like protein 2, chloroplastic Arabidopsis thaliana

  • Number of RefSeq hits:

General

Source Morganella morganii S5
Locus tag HKOGLL_07770
Feature type CDS
Gene csdE
Product cysteine desulfurase sulfur acceptor subunit CsdE
Location 170505 - 170951 (strand: -1)
Length 447 (nucleotides) / 148 (amino acids)

Contig

Accession ZDB_684
Length 217237 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1077
Orthogroup size 7
N. genomes 7

Actions

Genomic region

Domains

PF02657 Fe-S metabolism associated domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG2166 Posttranslational modification, protein turnover, chaperones (O) O Sulfur transfer protein SufE, Fe-S cluster assembly

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K02426 cysteine desulfuration protein SufE - -

Protein Sequence

MTHTFPAHPFGHSIRREQLTETFSACRSWEEKYRQLVMLARQLPALPPESKGEETEIKGCENRVWLDGTLSSDGTLHFWGDSDGRIVKGLLAVLLTEAEGLTPAALLSADLSAAYEQYGLSAQLSQSRQNGIQTLIDAARAIAQRFSA

Flanking regions ( +/- flanking 50bp)

AGGCGGTACAATTTGCTCTTGAAATTCAGGCTGACGACTGAGAGAAAAAAATGACACACACATTCCCGGCACACCCGTTCGGCCACTCTATCCGCCGTGAGCAGCTCACGGAAACCTTTTCCGCCTGCCGCTCATGGGAGGAAAAATACCGTCAGCTGGTGATGCTGGCACGTCAGTTACCGGCACTGCCGCCGGAAAGCAAAGGTGAAGAGACAGAAATTAAAGGCTGTGAAAACCGCGTCTGGCTGGATGGCACACTCAGCAGTGACGGTACGCTGCATTTTTGGGGGGACAGTGACGGGCGGATTGTTAAAGGTCTGCTGGCGGTACTGCTGACCGAAGCGGAAGGTCTGACACCGGCGGCACTGTTATCTGCGGATTTATCCGCAGCGTATGAACAGTACGGACTGAGCGCGCAGCTCAGCCAGTCCAGACAAAACGGCATTCAGACACTGATTGATGCCGCCCGCGCCATTGCACAGCGGTTCAGCGCCTGAAAGGCTTATTCCGCCGCAGCACGCTCCGCTTTTGCCACCAGTTTTTTCAG