Homologs in group_2651

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_04465 FBDBKF_04465 100.0 Morganella morganii S1 ebsC Cys-tRNA(Pro) deacylase, prolyl-tRNA editing enzyme YbaK/EbsC
EHELCC_05755 EHELCC_05755 100.0 Morganella morganii S2 ebsC Cys-tRNA(Pro) deacylase, prolyl-tRNA editing enzyme YbaK/EbsC
NLDBIP_06075 NLDBIP_06075 100.0 Morganella morganii S4 ebsC Cys-tRNA(Pro) deacylase, prolyl-tRNA editing enzyme YbaK/EbsC
LHKJJB_02955 LHKJJB_02955 100.0 Morganella morganii S3 ebsC Cys-tRNA(Pro) deacylase, prolyl-tRNA editing enzyme YbaK/EbsC
F4V73_RS08915 F4V73_RS08915 80.5 Morganella psychrotolerans - YbaK/EbsC family protein

Distribution of the homologs in the orthogroup group_2651

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2651

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P64483 1.82e-27 103 39 2 148 1 proXp-y Multifunctional Ser/Thr-tRNA deacylase ProXp-y Escherichia coli (strain K12)
P64484 1.82e-27 103 39 2 148 3 proXp-y Multifunctional Ser/Thr-tRNA deacylase ProXp-y Escherichia coli O157:H7
P37174 2.17e-07 51 26 5 153 3 ybaK Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
O31650 3.83e-05 45 25 2 136 3 yjdI Putative Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YjdI Bacillus subtilis (strain 168)
Q9L4Q7 0.000443 42 24 3 143 1 proX Prolyl-tRNA editing protein ProX Acetoanaerobium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / CCUG 9281 / NCIMB 10654 / HF)
A4IMD1 0.000816 42 28 1 74 3 proS Proline--tRNA ligase Geobacillus thermodenitrificans (strain NG80-2)

  • Number of RefSeq hits:

General

Source Morganella morganii S5
Locus tag HKOGLL_06430
Feature type CDS
Gene ebsC
Product Cys-tRNA(Pro) deacylase, prolyl-tRNA editing enzyme YbaK/EbsC
Location 86877 - 87371 (strand: -1)
Length 495 (nucleotides) / 164 (amino acids)

Contig

Accession ZDB_683
Length 224720 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2651
Orthogroup size 6
N. genomes 6

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Genomic region

Domains

PF04073 Aminoacyl-tRNA editing domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG2606 Translation, ribosomal structure and biogenesis (J) J Cys-tRNA(Pro) deacylase, prolyl-tRNA editing enzyme YbaK/EbsC

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K19055 Ala-tRNA(Pro) deacylase [EC:3.1.1.-] - -

Protein Sequence

MTTFDKITCLLDSQAVSFEVIEHPAEGRSDAISKIRGNKLSQAAKAMVLQVTGSTPDIRYVLAIVPGDCKVNFKNAAKLAGGKKASFAAPETAQALTGCPMGAVPPFSFNDELTLYVDKRLTGAGRVFFNAGELVRSVSLAADDYFSVIGHDRIADIAVPPAAE

Flanking regions ( +/- flanking 50bp)

TGAGAGTAAATTATGACGCAAGGGTTTCTCCGGCTGACTGTGAGGTTTATATGACAACATTTGACAAAATCACCTGTTTACTGGATTCACAGGCGGTTTCCTTTGAGGTGATCGAACATCCGGCGGAAGGCCGTTCTGATGCGATAAGTAAAATCAGGGGAAATAAACTGAGCCAGGCGGCGAAAGCCATGGTGTTGCAGGTTACCGGCAGCACACCGGACATCCGCTATGTGCTGGCGATTGTGCCGGGCGACTGCAAAGTCAATTTTAAAAATGCCGCGAAACTGGCGGGCGGGAAGAAAGCCTCATTTGCCGCACCGGAAACAGCACAGGCGCTGACCGGCTGCCCGATGGGTGCGGTCCCGCCGTTCAGCTTTAATGACGAACTGACGCTGTATGTTGATAAGCGTCTGACCGGTGCCGGACGGGTATTTTTTAATGCCGGTGAACTGGTGAGATCGGTGTCTCTGGCAGCGGATGACTATTTCAGTGTGATCGGTCATGATCGCATTGCGGATATTGCGGTACCTCCCGCCGCAGAATAACAATGATAACGGAGAATAACGATGGAATATTGTGTTGCTGAACTGACGGA