Homologs in group_3398

Help

4 homologs were identified in 4 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_13250 FBDBKF_13250 100.0 Morganella morganii S1 perC PerC family transcriptional regulator
EHELCC_08845 EHELCC_08845 100.0 Morganella morganii S2 perC PerC family transcriptional regulator
NLDBIP_09170 NLDBIP_09170 100.0 Morganella morganii S4 perC PerC family transcriptional regulator
LHKJJB_05095 LHKJJB_05095 100.0 Morganella morganii S3 perC PerC family transcriptional regulator

Distribution of the homologs in the orthogroup group_3398

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_3398

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella morganii S5
Locus tag HKOGLL_05820
Feature type CDS
Gene perC
Product PerC family transcriptional regulator
Location 226292 - 226498 (strand: -1)
Length 207 (nucleotides) / 68 (amino acids)

Contig

Accession ZDB_682
Length 259781 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3398
Orthogroup size 5
N. genomes 5

Actions

Genomic region

Protein Sequence

MNLFNDLMISGSRLEKRKLYRRAAEQYNKAFHLAEPGNGAVLSKQEKTSKQAMERCLIKSKIKIAEGL

Flanking regions ( +/- flanking 50bp)

CTTCATTACAGAGTTAATTGCTGAAAACATGCACAGAAAGGAATTTAAGAATGAACCTGTTTAATGACCTGATGATATCCGGCAGCAGATTAGAAAAGCGGAAGTTATATCGCCGTGCAGCAGAGCAATATAACAAAGCATTTCATTTAGCCGAGCCCGGTAACGGTGCCGTATTAAGCAAGCAGGAAAAAACAAGTAAACAGGCAATGGAACGTTGCCTGATTAAATCAAAAATTAAAATCGCAGAGGGTTTGTGATGAAAAATAAATTAACCACGATTGATGCAACCGCCCTGCCAGTAATTGAA