Homologs in group_3506

Help

4 homologs were identified in 4 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_17915 FBDBKF_17915 100.0 Morganella morganii S1 irpP IrpP
EHELCC_06420 EHELCC_06420 100.0 Morganella morganii S2 irpP IrpP
NLDBIP_06740 NLDBIP_06740 100.0 Morganella morganii S4 irpP IrpP
LHKJJB_19340 LHKJJB_19340 100.0 Morganella morganii S3 irpP IrpP

Distribution of the homologs in the orthogroup group_3506

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_3506

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella morganii S5
Locus tag HKOGLL_04650
Feature type CDS
Gene irpP
Product IrpP
Location 256318 - 256461 (strand: 1)
Length 144 (nucleotides) / 47 (amino acids)

Contig

Accession ZDB_681
Length 269562 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3506
Orthogroup size 5
N. genomes 5

Actions

Genomic region

Protein Sequence

MFNNKTKNTIIKNKSDWLTIPEAVYLANQKKTEKQLTDSDVYRHALS

Flanking regions ( +/- flanking 50bp)

ATTATAAAAAACCATCAATATATTAGCACTCATATAAATAAGGAAAAATTATGTTTAACAATAAAACAAAAAATACTATTATTAAAAATAAATCCGATTGGTTAACCATACCTGAAGCTGTATACCTAGCCAACCAGAAAAAAACAGAGAAACAATTAACCGACAGCGACGTTTATCGCCATGCGCTATCTTGAAACATTTATTTATCTATATACTTTCAATCTACAATTATATTAAGGAAAGT