Homologs in group_2647

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_03850 FBDBKF_03850 100.0 Morganella morganii S1 yubB YubB ferredoxin-like domain-containing protein
EHELCC_06685 EHELCC_06685 100.0 Morganella morganii S2 yubB YubB ferredoxin-like domain-containing protein
NLDBIP_07010 NLDBIP_07010 100.0 Morganella morganii S4 yubB YubB ferredoxin-like domain-containing protein
LHKJJB_06545 LHKJJB_06545 100.0 Morganella morganii S3 yubB YubB ferredoxin-like domain-containing protein
PMI_RS12625 PMI_RS12625 100.0 Proteus mirabilis HI4320 - DUF1281 domain-containing protein

Distribution of the homologs in the orthogroup group_2647

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2647

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q9S4X4 1.81e-27 107 38 3 162 4 yubB Uncharacterized protein YubB Escherichia coli (strain K12)
Q9S4X5 1.62e-16 79 31 4 154 4 yubA Uncharacterized protein YubA Escherichia coli (strain K12)

  • Number of RefSeq hits:

General

Source Morganella morganii S5
Locus tag HKOGLL_04385
Feature type CDS
Gene yubB
Product YubB ferredoxin-like domain-containing protein
Location 197064 - 198065 (strand: -1)
Length 1002 (nucleotides) / 333 (amino acids)
In genomic island -

Contig

Accession ZDB_681
Length 269562 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2647
Orthogroup size 6
N. genomes 6

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Genomic region

Domains

PF06924 Protein of unknown function (DUF1281)
PF18406 Ferredoxin-like domain in Api92-like protein

Protein Sequence

MPNWCSNRLDITLHNAADMPALKHWIYADDGIPAWQTAIAQSLHLLLAGCAGILKPVRPLSFPPLPELTSYGATGPVSPGNTAFTHWVDLLMTAPDLTPSCCQQIHQWYQMWLSEGGAYHSWDSLTATQKARLSPLLSGSSFDWLNRFTGEDESRVATAWEDIQYLRSTGEAIPMDMRTLLPTSLAAELHGFNGCLWKTPEVIWRQARWQAFAPGNSTYHLYQCRYGVKWPNGSGFHCIDGGYATELSAEFDTPWGPPSAAVLCALSARFRCQVRHVYAEEGCGFCGYSEYDHGRLTDHESDEIEFSDEENEDGFQDVTGPDYILDSLPHYGG

Flanking regions ( +/- flanking 50bp)

GTTCCTCACGGGATAAGCCCTCTTTTTTATTCTGAAAAGAGGACATCATCATGCCAAACTGGTGCTCGAACCGACTTGACATCACCTTACACAACGCGGCGGATATGCCGGCTCTTAAACACTGGATATATGCGGATGATGGGATACCCGCCTGGCAGACGGCGATAGCACAAAGTCTGCATTTGTTGCTGGCCGGCTGCGCGGGGATACTGAAACCGGTCAGACCGCTGTCTTTTCCGCCGTTACCGGAACTGACTTCATACGGTGCAACCGGGCCTGTTTCCCCGGGAAACACGGCTTTCACGCACTGGGTTGACCTGCTGATGACTGCACCGGATTTGACACCGTCATGTTGTCAGCAAATCCATCAGTGGTATCAGATGTGGTTATCTGAAGGCGGGGCGTACCATTCCTGGGACTCGCTGACGGCGACGCAGAAAGCGAGACTGTCCCCGTTGTTATCGGGAAGCAGTTTTGACTGGCTTAACCGGTTTACCGGAGAGGATGAGAGCCGGGTGGCGACAGCCTGGGAGGATATTCAGTACCTTCGCAGTACCGGAGAAGCCATACCGATGGATATGCGGACTCTGTTACCGACCAGCCTTGCGGCTGAATTACACGGTTTTAACGGCTGTTTATGGAAAACACCGGAGGTCATCTGGCGGCAGGCGCGCTGGCAGGCGTTTGCCCCCGGTAACAGTACATATCACCTTTATCAGTGCCGTTATGGTGTGAAATGGCCGAACGGCAGTGGTTTTCACTGTATTGATGGCGGGTATGCGACGGAGTTATCCGCAGAGTTTGATACTCCGTGGGGGCCGCCGTCAGCAGCGGTTTTGTGTGCTCTGTCTGCGCGTTTCCGCTGTCAGGTCCGTCATGTCTATGCCGAAGAAGGCTGTGGTTTCTGCGGATACAGCGAGTATGACCATGGCCGGTTAACCGACCATGAATCTGATGAGATTGAGTTCAGTGATGAAGAGAATGAGGACGGTTTCCAGGATGTGACGGGACCGGACTATATTCTTGATTCATTGCCACATTACGGAGGGTGAGGTTTCCGTACTGATTTAACTGACTGAAAACCCGGTAGTGATACCGGGTT