Homologs in group_3232

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4 homologs were identified in 4 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_03755 FBDBKF_03755 100.0 Morganella morganii S1 - YD repeat-containing protein
EHELCC_06780 EHELCC_06780 100.0 Morganella morganii S2 - YD repeat-containing protein
NLDBIP_07105 NLDBIP_07105 100.0 Morganella morganii S4 - YD repeat-containing protein
LHKJJB_06640 LHKJJB_06640 100.0 Morganella morganii S3 - YD repeat-containing protein

Distribution of the homologs in the orthogroup group_3232

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3232

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella morganii S5
Locus tag HKOGLL_04290
Feature type CDS
Gene -
Product YD repeat-containing protein
Location 178114 - 178953 (strand: 1)
Length 840 (nucleotides) / 279 (amino acids)
In genomic island -

Contig

Accession ZDB_681
Length 269562 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3232
Orthogroup size 5
N. genomes 5

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Genomic region

Protein Sequence

MRKTVTLLALCLPLSAAMADDSSCTDAQRQLNRENTYIITGLYLNGPVKSVVTTRNNKQKSYGSSETTITLSPCGAVTQYEQQMYYLISPDVYRKEQYKTDPDNPLHLTGTAEYKFHGKHINSQTDITRTINDKGQIAGYTLLNKNTGDDEQEDAVTARINWENSRLHSMDEVKTDGEKSESLFYRYDSQGRLSHVSRGSGSSETRFTYTAQPWPSVTLISIYSGSELLNVLTERCEQWDHHGNCLLQKNYIADYYGYSADDNPEPVLQTIQRYRYEYY

Flanking regions ( +/- flanking 50bp)

TATCGGTGATACAGTAACCTCATCCGCTGATACAGAGAGAGAATTTAAGGATGAGAAAAACAGTTACCCTGCTGGCGCTCTGCCTGCCGCTGTCCGCAGCAATGGCAGACGACAGCAGTTGTACGGACGCACAGCGTCAGCTGAACCGGGAAAATACCTATATTATCACCGGCCTGTATCTGAACGGGCCGGTCAAATCCGTTGTTACCACACGCAATAACAAACAAAAATCTTACGGCAGCAGCGAAACCACCATTACATTGTCACCGTGCGGTGCCGTGACGCAGTATGAGCAGCAGATGTACTATCTGATAAGCCCGGATGTTTACCGGAAAGAACAGTACAAAACAGATCCGGATAATCCGCTTCACCTGACCGGCACAGCAGAATACAAATTTCACGGTAAACACATTAATTCACAAACAGACATCACCCGGACGATAAATGATAAAGGACAGATTGCCGGCTATACCTTACTGAATAAAAATACCGGTGACGATGAACAGGAGGATGCCGTTACTGCCCGTATCAATTGGGAAAACAGCCGGCTCCACAGTATGGATGAGGTGAAAACGGACGGAGAAAAATCAGAAAGTCTCTTTTACCGCTATGATTCACAAGGCCGCCTGTCACACGTTTCCCGTGGCTCCGGTTCCTCAGAGACCCGCTTTACTTACACTGCTCAGCCGTGGCCATCAGTCACTTTGATCTCTATTTACAGCGGCAGCGAACTGCTGAATGTACTCACCGAACGTTGTGAACAATGGGATCATCACGGTAACTGTCTGCTGCAAAAAAATTATATCGCCGATTATTACGGCTATTCTGCGGATGACAATCCGGAGCCGGTCTTACAGACCATTCAGCGTTACCGTTATGAATATTACTGAATATAAAAAAACCGCCGCTGATTCAGCGGCGGTTTTGTAATTCATCACGT