Homologs in group_2481

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_01015 FBDBKF_01015 100.0 Morganella morganii S1 ydeI putative periplasmic protein YdeI with OB-fold, BOF family
EHELCC_00530 EHELCC_00530 100.0 Morganella morganii S2 ydeI putative periplasmic protein YdeI with OB-fold, BOF family
NLDBIP_02930 NLDBIP_02930 100.0 Morganella morganii S4 ydeI putative periplasmic protein YdeI with OB-fold, BOF family
LHKJJB_04445 LHKJJB_04445 100.0 Morganella morganii S3 ydeI putative periplasmic protein YdeI with OB-fold, BOF family
F4V73_RS07090 F4V73_RS07090 66.9 Morganella psychrotolerans - NirD/YgiW/YdeI family stress tolerance protein

Distribution of the homologs in the orthogroup group_2481

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2481

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0ADU5 1.75e-10 58 32 0 82 1 ygiW Protein YgiW Escherichia coli (strain K12)
P0ADU6 1.75e-10 58 32 0 82 3 ygiW Protein YgiW Escherichia coli O157:H7
P44293 0.000146 42 25 1 95 1 HI_1709 Uncharacterized protein HI_1709 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P31130 0.000191 42 26 1 100 3 ydeI Uncharacterized protein YdeI Escherichia coli (strain K12)

  • Number of RefSeq hits:

General

Source Morganella morganii S5
Locus tag HKOGLL_02600
Feature type CDS
Gene ydeI
Product putative periplasmic protein YdeI with OB-fold, BOF family
Location 124666 - 125079 (strand: -1)
Length 414 (nucleotides) / 137 (amino acids)

Contig

Accession ZDB_680
Length 282413 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2481
Orthogroup size 6
N. genomes 6

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Genomic region

Domains

PF04076 Bacterial OB fold (BOF) protein

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3111 Function unknown (S) S Predicted periplasmic protein YdeI with OB-fold, BOF family

Protein Sequence

MAEMTFTSSTFYLFSAVVLTGTFWFQPAAALPSFSAYEYHQSTVKCETPQRFIIKQLPYLQDNSRVILEGNIQSQISAEHYLLGDYSGIVEVKIPAELWGKKIITPNDTIRIEGGMEKDRHAIVVTADTLSVVNPGS

Flanking regions ( +/- flanking 50bp)

ATATCTCCTGGTATATAACCGACATTTTTCATTTACCGGCGTCGTAAGCTATGGCTGAAATGACATTCACATCATCGACTTTTTACCTGTTTTCAGCGGTTGTTCTGACAGGTACATTCTGGTTTCAGCCTGCTGCGGCTCTGCCGTCATTTTCTGCCTATGAGTATCATCAGAGCACAGTAAAATGTGAAACACCACAGCGCTTTATCATCAAACAACTGCCCTATCTGCAGGATAACAGCCGGGTGATTCTGGAAGGTAATATTCAGTCTCAGATTTCAGCGGAGCACTATCTGCTGGGGGATTACAGCGGTATCGTCGAGGTAAAAATCCCTGCGGAATTATGGGGGAAAAAGATTATCACCCCTAATGATACCATCCGCATTGAAGGCGGAATGGAAAAAGACCGCCATGCGATTGTGGTAACCGCCGATACACTCAGTGTGGTCAACCCCGGCAGTTAATATTCCGGGTCGGTGATCAGCCGTTTGCTGTAGGTCAGGCTGTCCTGCTG