Homologs in group_744

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_02410 FBDBKF_02410 100.0 Morganella morganii S1 padR PadR family transcriptional regulator
EHELCC_02880 EHELCC_02880 100.0 Morganella morganii S2 padR PadR family transcriptional regulator
NLDBIP_00580 NLDBIP_00580 100.0 Morganella morganii S4 padR PadR family transcriptional regulator
LHKJJB_01455 LHKJJB_01455 100.0 Morganella morganii S3 padR PadR family transcriptional regulator
F4V73_RS04790 F4V73_RS04790 84.5 Morganella psychrotolerans - PadR family transcriptional regulator
PMI_RS05840 PMI_RS05840 48.6 Proteus mirabilis HI4320 - PadR family transcriptional regulator

Distribution of the homologs in the orthogroup group_744

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_744

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P64589 4.02e-29 112 37 5 206 4 yqjI Uncharacterized protein YqjI Shigella flexneri
P64588 4.02e-29 112 37 5 206 1 yqjI Transcriptional regulator YqjI Escherichia coli (strain K12)
C0H3S6 3.74e-07 50 37 1 90 4 ywzG Putative DNA-binding protein YwzG Bacillus subtilis (strain 168)
I6X7F9 1.87e-05 46 40 1 60 1 Rv3488 Transcriptional regulator Rv3488 Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)

  • Number of RefSeq hits:

General

Source Morganella morganii S5
Locus tag HKOGLL_01495
Feature type CDS
Gene padR
Product PadR family transcriptional regulator
Location 282783 - 283538 (strand: 1)
Length 756 (nucleotides) / 251 (amino acids)
In genomic island -

Contig

Accession ZDB_679
Length 398279 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_744
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF03551 Transcriptional regulator PadR-like family

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1695 Transcription (K) K DNA-binding transcriptional regulator, PadR family

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K10947 PadR family transcriptional regulator - -

Protein Sequence

MFLHALRHRACDSQEGRQRRGGHGGRHGERHGQDGHRCHGEHHGHDEHRSHCCHGDHHGHDGQHEHGCHGDHHEHHEGHGRHRGRGKGLRRLLDHGDLRIMMLANLNQKPSHGYELIKSIGQLTSGLYTPSPGVIYPTLTLLEDQQLIVAENTGNGRKSYSLTPEGKMHLEENTDVLEQIAQRLQETKSFRRGSLLSDEIEQALGNLRALLRHKLVTSELDETKLGQIADILNDAVRKIEAVNDALSKEGE

Flanking regions ( +/- flanking 50bp)

TAAATTCTGATTTTGCTGATTATCACTATTTATCACAAAAGGAATTTATTATGTTTCTTCATGCTTTACGCCACCGCGCCTGTGATTCACAGGAAGGGCGTCAGCGCCGCGGGGGTCATGGCGGCCGTCACGGGGAACGACACGGACAAGACGGGCATCGTTGCCACGGCGAACATCACGGTCACGACGAACACCGCAGCCATTGCTGCCATGGTGATCATCACGGACATGACGGACAACACGAACATGGTTGCCACGGTGATCATCATGAGCACCACGAAGGCCACGGTCGTCACCGCGGTCGCGGAAAAGGGCTTCGCCGTCTGCTTGATCATGGTGACCTGCGTATTATGATGCTGGCTAATCTTAACCAGAAACCGAGTCACGGTTATGAGTTAATCAAATCTATCGGTCAGTTGACTTCCGGCCTCTATACACCGAGTCCGGGCGTGATTTACCCGACACTGACCCTGCTCGAAGATCAGCAGCTGATTGTCGCGGAAAACACCGGTAACGGCCGTAAAAGCTACAGCCTGACACCGGAAGGTAAAATGCATCTGGAAGAGAACACCGATGTTCTGGAACAGATTGCACAGCGCCTGCAGGAGACCAAATCTTTCCGCCGTGGTTCTCTGTTATCAGATGAAATCGAGCAGGCTCTGGGGAATTTACGGGCACTGCTGCGCCATAAACTGGTCACCAGTGAACTGGATGAAACCAAGCTCGGGCAGATTGCCGATATTCTTAATGATGCAGTACGGAAAATAGAAGCGGTTAACGACGCGCTGAGTAAAGAAGGGGAATAATATGGCGGAAAACACCACCTCCGGAAAAATCCCGCCGGAAAAGCCGGTTC