Homologs in group_3188

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4 homologs were identified in 4 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_01550 FBDBKF_01550 100.0 Morganella morganii S1 - Holin
EHELCC_02020 EHELCC_02020 100.0 Morganella morganii S2 - Holin
NLDBIP_01440 NLDBIP_01440 100.0 Morganella morganii S4 - Holin
LHKJJB_00595 LHKJJB_00595 100.0 Morganella morganii S3 - Holin

Distribution of the homologs in the orthogroup group_3188

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3188

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella morganii S5
Locus tag HKOGLL_00635
Feature type CDS
Gene -
Product Holin
Location 107066 - 107338 (strand: 1)
Length 273 (nucleotides) / 90 (amino acids)

Contig

Accession ZDB_679
Length 398279 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3188
Orthogroup size 5
N. genomes 5

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Genomic region

Domains

PF05449 Putative 3TM holin, Phage_holin_3

Protein Sequence

MFEKVLIILNAIICSVIFVRVFSFRRNGRQHCAKGAWIAWLILSYSASVPVRAYFDPVYHADITSVISNLIICAAVLVYRGNVMSFFKAG

Flanking regions ( +/- flanking 50bp)

GCTGAGCATTAAAGCGTACCGAAAAGCGGATAGTCCGCAAGGAGGCAATGATGTTTGAGAAAGTTTTGATCATTCTGAATGCCATCATCTGCTCAGTGATTTTTGTCCGGGTGTTTTCGTTCAGACGCAACGGCCGGCAGCACTGCGCAAAAGGGGCATGGATAGCCTGGCTCATTCTGTCTTATTCCGCGAGTGTGCCGGTGCGGGCCTACTTTGATCCTGTCTATCACGCTGATATCACCAGCGTGATTTCAAATCTTATTATCTGTGCTGCGGTGCTGGTGTATCGCGGCAATGTCATGTCATTTTTTAAAGCGGGGTGATTTATGCCGGAACAGGTTAAACAAAAAATCTTTAAGGATGGTTTCGTTAA