Homologs in group_3499

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4 homologs were identified in 4 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_17305 FBDBKF_17305 100.0 Morganella morganii S1 - Antitermination protein Q
EHELCC_01585 EHELCC_01585 100.0 Morganella morganii S2 - Antitermination protein Q
NLDBIP_01875 NLDBIP_01875 100.0 Morganella morganii S4 - Antitermination protein Q
LHKJJB_00160 LHKJJB_00160 100.0 Morganella morganii S3 - Antitermination protein Q

Distribution of the homologs in the orthogroup group_3499

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3499

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q9T1U3 4.06e-35 122 48 1 134 3 5 Probable antitermination protein Q Acyrthosiphon pisum secondary endosymbiont phage 1
Q47274 1.52e-20 84 36 2 121 3 quuD Prophage antitermination protein Q homolog QuuD Escherichia coli (strain K12)
O48429 3.19e-19 81 35 2 121 3 Q Antitermination protein Q Enterobacteria phage H19B
P68923 2.72e-18 79 35 2 121 3 Q Antitermination protein Q Enterobacteria phage VT2-Sa
P68922 2.72e-18 79 35 2 121 3 Q Antitermination protein Q Escherichia phage 933W

  • Number of RefSeq hits:

General

Source Morganella morganii S5
Locus tag HKOGLL_00200
Feature type CDS
Gene -
Product Antitermination protein Q
Location 34639 - 35070 (strand: 1)
Length 432 (nucleotides) / 143 (amino acids)

Contig

Accession ZDB_679
Length 398279 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3499
Orthogroup size 5
N. genomes 5

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Genomic region

Domains

PF06530 Phage antitermination protein Q

Protein Sequence

MSRDIQTILLHWGGWAAGGHCAGMGWARVSSGFRELAQNSSKQRPSCSDEDGRVIDRCVSMLGTAGLERERDYITDYYVKGMSKRAIGRKYKVREDEIRKQVQSAESFIFGCLETLAVQLDMDSLYKAYPDVRSTLVRPQTAC

Flanking regions ( +/- flanking 50bp)

AGAGTAGCTGATACCGGGAAATAAATACGGATACTATACAGGTGAATATTATGAGCAGAGACATTCAGACGATACTGTTGCACTGGGGCGGTTGGGCAGCGGGTGGTCACTGTGCGGGCATGGGCTGGGCCCGTGTTTCATCCGGATTCCGGGAACTTGCTCAGAACAGCAGTAAACAGAGACCCTCATGCAGCGATGAGGATGGCCGGGTTATCGACCGTTGTGTATCTATGCTGGGTACGGCCGGTCTGGAACGTGAGCGCGACTATATTACGGATTATTACGTGAAAGGGATGAGCAAGCGGGCGATCGGGCGTAAATATAAAGTCCGCGAGGATGAAATCCGTAAACAGGTACAGAGTGCGGAAAGTTTTATTTTTGGTTGTCTGGAAACACTGGCAGTGCAACTGGATATGGATAGTTTATATAAAGCCTATCCTGATGTCCGGAGCACATTGGTGCGGCCGCAAACGGCATGCTAATCTGTAAAAAATAACGAATTACATATTGAAAGGCATTCAGATTCTGAGTG