Homologs in group_3617

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4 homologs were identified in 4 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
EHELCC_19095 EHELCC_19095 100.0 Morganella morganii S2 tnp IS21 family IS1326 transposase
NLDBIP_19570 NLDBIP_19570 100.0 Morganella morganii S4 tnp IS21 family IS1326 transposase
LHKJJB_19495 LHKJJB_19495 100.0 Morganella morganii S3 tnp IS21 family IS1326 transposase
HKOGLL_19450 HKOGLL_19450 100.0 Morganella morganii S5 tnp IS21 family IS1326 transposase

Distribution of the homologs in the orthogroup group_3617

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3617

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0A135 0.0 1046 99 0 504 3 istA Transposase for insertion sequences IS1326/IS1353 Shigella flexneri
P0A134 0.0 1046 99 0 504 3 istA Transposase for insertion sequences IS1326/IS1353 Pseudomonas aeruginosa
Q46087 0.0 628 59 1 502 3 nmoT Transposase Aminobacter aminovorans
Q45618 2.13e-24 108 26 7 339 1 None Putative transposase for insertion sequence element IS5376 Geobacillus stearothermophilus
P15025 5.02e-22 101 27 8 354 3 istA Transposase for insertion sequence element IS21 Pseudomonas aeruginosa
Q99335 4.13e-17 87 23 11 358 3 None Transposase for insertion sequence element IS232 Bacillus thuringiensis subsp. berliner
P16944 9.45e-13 72 27 5 266 3 istA Transposase for insertion sequence element IS640 Shigella sonnei
Q50700 2.2e-08 60 24 11 335 3 Rv3428c Putative transposase Rv3428c Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Q45119 3.19e-08 59 22 18 486 3 tnpA Transposase for insertion sequence element IS21-like Bacteroides fragilis
Q64NF0 3.52e-05 50 23 20 491 3 tnpA Transposase for insertion sequence element IS21-like Bacteroides fragilis (strain YCH46)
Q53201 5.36e-05 49 23 15 398 3 NGR_a01310 Putative transposase y4uI Sinorhizobium fredii (strain NBRC 101917 / NGR234)

  • Number of RefSeq hits:

General

Source Morganella morganii S1
Locus tag FBDBKF_20275
Feature type CDS
Gene tnp
Product IS21 family IS1326 transposase
Location 967 - 2481 (strand: -1)
Length 1515 (nucleotides) / 504 (amino acids)

Contig

Accession contig_50
Length 10655 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3617
Orthogroup size 5
N. genomes 5

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Genomic region

Domains

PF22483 Mu transposase, C-terminal domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG4584 Mobilome: prophages, transposons (X) X Transposase

Protein Sequence

MAILSAIRRWHFRDGASIREIARRSGLSRNTVRKYLQSKVVEPQYPARDSVGKLSPFEPKLRQWLSTEHKKTKKLRRNLRSMYRDLVALGFTGSYDRVCAFARQWKDSEQFKAQTSGKGCFIPLRFACGEAFQFDWSEDFARIAGKQVKLQIAQFKLAHSRAFVLRAYYQQKHEMLFDAHWHAFQIFGGIPKRGIYDNMKTAVDSVGRGKERRVNQRFTAMVSHYLFDAQFCNPASGWEKGQIEKNVQDSRQRLWQGAPDFQSLADLNVWLEHRCKALWSELRHPELDQTVQEAFADEQGELMALPNAFDAFVEQTKRVTSTCLVHHEGNRYSVPASYANRAISLRIYADKLVMAAEGQHIAEHPRLFGSGHARRGHTQYDWHHYLSVLQKKPGALRNGAPFAELPPAFKKLQSILLQRPGGDRDMVEILALVLHHDEGAVLSAVELALECGKPSKEHVLNLLGRLTEEPPPKPIPIPKGLRLTLEPQANVNRYDSLRRAHDAA

Flanking regions ( +/- flanking 50bp)

GACACTGTTTCCCGTCTGGATATGGCGGGAGAAATCAAGGAGTGATAAACGTGGCGATATTGAGCGCAATTCGACGCTGGCATTTTCGCGATGGTGCGTCGATTCGGGAAATAGCCCGACGAAGCGGCCTGTCCAGGAACACCGTTCGCAAGTATTTGCAAAGCAAGGTGGTTGAACCGCAGTACCCAGCGCGAGACAGCGTTGGCAAGTTAAGTCCTTTTGAGCCCAAGTTAAGGCAGTGGCTCTCCACCGAGCACAAAAAGACAAAGAAGCTGCGCAGAAACCTGCGCAGCATGTACCGGGATTTGGTCGCTTTGGGCTTTACCGGGTCTTATGACCGAGTGTGTGCCTTTGCCCGACAGTGGAAAGATTCCGAACAGTTCAAGGCGCAAACCTCGGGCAAGGGTTGTTTCATCCCCTTGCGCTTTGCTTGTGGCGAAGCCTTCCAATTCGATTGGAGTGAGGACTTTGCCCGCATAGCGGGCAAACAGGTCAAACTTCAGATTGCCCAGTTTAAGTTGGCCCACAGCCGGGCCTTTGTGCTTCGGGCTTACTACCAGCAAAAACATGAAATGCTGTTTGATGCCCACTGGCATGCCTTTCAAATCTTCGGTGGCATTCCCAAGCGCGGCATCTACGACAACATGAAGACCGCTGTGGATTCGGTGGGGCGTGGCAAAGAGCGCAGGGTCAATCAGCGGTTCACTGCCATGGTCAGCCACTACCTGTTTGATGCGCAGTTCTGTAATCCAGCATCGGGTTGGGAGAAAGGCCAGATTGAGAAGAACGTGCAGGATTCCCGCCAACGCCTGTGGCAAGGGGCACCAGACTTTCAAAGCCTTGCTGATTTGAATGTGTGGCTTGAGCATCGCTGCAAAGCGCTGTGGTCTGAGCTGCGCCACCCCGAATTGGACCAAACCGTGCAAGAGGCCTTTGCCGATGAACAAGGCGAGTTGATGGCGCTACCCAATGCCTTTGATGCATTCGTGGAGCAAACCAAGCGAGTCACTTCAACCTGCCTTGTTCACCACGAGGGCAATCGCTACAGCGTTCCTGCCAGTTACGCCAACAGGGCCATCAGCCTTCGGATTTATGCAGACAAGCTGGTGATGGCTGCCGAAGGCCAACACATTGCCGAGCATCCAAGATTGTTTGGCAGTGGCCACGCTCGGCGTGGCCACACACAATACGACTGGCACCATTACTTGTCTGTGCTTCAGAAGAAACCTGGGGCGTTGCGCAATGGTGCGCCATTTGCTGAATTGCCACCCGCGTTCAAGAAGCTTCAATCCATCTTGCTGCAACGCCCCGGCGGTGACCGTGACATGGTGGAAATTCTGGCCCTTGTATTGCACCACGATGAAGGTGCGGTACTCAGTGCTGTGGAATTGGCATTGGAGTGTGGCAAGCCATCGAAGGAGCATGTGCTTAATCTGTTGGGACGTTTGACCGAAGAACCTCCACCCAAACCGATTCCAATTCCCAAGGGGTTAAGGCTGACATTGGAACCACAGGCCAACGTGAACCGCTATGACAGTTTAAGGAGAGCCCATGATGCAGCATGAAGGCCATGTGAGAATCCTCAAATCCTTGAAACTCTTTGGCATGGCACACG