Homologs in group_3776

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1 homologs were identified in 1 genome with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
F4V73_RS19475 F4V73_RS19475 33.9 Morganella psychrotolerans - helicase RepA family protein

Distribution of the homologs in the orthogroup group_3776

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3776

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P20356 0.0 566 100 0 279 1 repA Regulatory protein RepA Escherichia coli
P05830 5.08e-59 186 100 0 93 4 repI Regulatory protein RepI (Fragment) Escherichia coli

  • Number of RefSeq hits:

General

Source Morganella morganii S1
Locus tag FBDBKF_20190
Feature type CDS
Gene repA
Product Regulatory protein RepA
Location 9048 - 9887 (strand: 1)
Length 840 (nucleotides) / 279 (amino acids)

Contig

Accession contig_48
Length 11780 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3776
Orthogroup size 2
N. genomes 2

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Genomic region

Domains

PF13481 AAA domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3598 Replication, recombination and repair (L) L RecA-family ATPase

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K07505 regulatory protein RepA - -

Protein Sequence

MATHKPINILEAFAAAPPPLDYVLPNMVAGTVGALVSPGGAGKSMLALQLAAQIAGGPDLLEVGELPTGPVIYLPAEDPPTAIHHRLHALGAHLSAEERQAVADGLLIQPLIGSLPNIMAPEWFDGLKRAAEGRRLMVLDTLRRFHIEEENASGPMAQVIGRMEAIAADTGCSIVFLHHASKGAAMMGAGDQQQASRGSSVLVDNIRWQSYLSSMTSAEAEEWGVDDDQRRFFVRFGVSKANYGAPFADRWFRRHDGGVLKPAVLERQRKSKGVPRGEA

Flanking regions ( +/- flanking 50bp)

AGTGACCCCGCCAGCGCCTAACCACCAACTGCCTGCAAAGGAGGCAATCAATGGCTACCCATAAGCCTATCAATATTCTGGAGGCGTTCGCAGCAGCGCCGCCACCGCTGGACTACGTTTTGCCCAACATGGTGGCCGGTACGGTCGGGGCGCTGGTGTCGCCCGGTGGTGCCGGTAAATCCATGCTGGCCCTGCAACTGGCCGCACAGATTGCAGGCGGGCCGGATCTGCTGGAGGTGGGCGAACTGCCCACCGGCCCGGTGATCTACCTGCCCGCCGAAGACCCGCCCACCGCCATTCATCACCGCCTGCACGCCCTTGGGGCGCACCTCAGCGCCGAGGAACGGCAAGCCGTGGCTGACGGCCTGCTGATCCAGCCGCTGATCGGCAGCCTGCCCAACATCATGGCCCCGGAGTGGTTCGACGGCCTCAAGCGCGCCGCCGAGGGCCGCCGCCTGATGGTGCTGGACACGCTGCGCCGGTTCCACATCGAGGAAGAAAACGCCAGCGGCCCCATGGCCCAGGTCATCGGTCGCATGGAGGCCATCGCCGCCGACACCGGGTGCTCTATCGTGTTCCTGCACCATGCCAGCAAGGGCGCGGCCATGATGGGCGCAGGCGACCAGCAGCAGGCCAGCCGGGGCAGCTCGGTACTGGTCGATAACATCCGCTGGCAGTCCTACCTGTCGAGCATGACCAGCGCCGAGGCCGAGGAATGGGGTGTGGACGACGACCAGCGCCGGTTCTTCGTCCGCTTCGGTGTGAGCAAGGCCAACTATGGCGCACCGTTCGCTGATCGGTGGTTCAGGCGGCATGACGGCGGGGTGCTCAAGCCCGCCGTGCTGGAGAGGCAGCGCAAGAGCAAGGGGGTGCCCCGTGGTGAAGCCTAAGAACAAGCACAGCCTCAGCCACGTCCGGCACGACCCGGCGCACTGTCTGG