Homologs in group_3593

Help

4 homologs were identified in 4 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
EHELCC_10560 EHELCC_10560 100.0 Morganella morganii S2 - TIGR03761 family integrating conjugative element protein
NLDBIP_10905 NLDBIP_10905 100.0 Morganella morganii S4 - TIGR03761 family integrating conjugative element protein
LHKJJB_10450 LHKJJB_10450 100.0 Morganella morganii S3 - TIGR03761 family integrating conjugative element protein
HKOGLL_16615 HKOGLL_16615 100.0 Morganella morganii S5 - TIGR03761 family integrating conjugative element protein

Distribution of the homologs in the orthogroup group_3593

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_3593

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella morganii S1
Locus tag FBDBKF_19835
Feature type CDS
Gene -
Product TIGR03761 family integrating conjugative element protein
Location 11256 - 11795 (strand: 1)
Length 540 (nucleotides) / 179 (amino acids)

Contig

Accession contig_44
Length 17289 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3593
Orthogroup size 5
N. genomes 5

Actions

Genomic region

Domains

PF08900 Transcriptional regulator AcaB

Protein Sequence

MMIDSTKNSAGTLTGGFHIELHTHYAAGIWNGRSAAGTKKKLIGVPPFLTLISRIHNDALTGNLAAGFVLSALEEKLISAGNAFQQWQYELGMMIAGLPVNIIISDAVSAQPLTVAVHCLNPLGYRFACLLAEFDQLALRILQAYHYGLISMKEKKARLHYCSHQIRRIFAVVVQYHLE

Flanking regions ( +/- flanking 50bp)

CTTTCATCATTGGTAGCACAGTCATCCCGTTAACTAACACAGGATGAATGATGATGATTGACAGCACCAAAAACAGCGCTGGGACTCTGACTGGCGGGTTTCATATCGAGCTGCACACCCACTATGCAGCAGGTATCTGGAATGGACGTTCAGCCGCCGGAACAAAAAAGAAGCTGATTGGCGTACCGCCGTTTCTTACCCTGATTTCTCGCATTCATAACGATGCACTGACCGGCAATTTGGCGGCAGGTTTCGTATTATCGGCGCTGGAGGAAAAACTAATTTCAGCCGGTAACGCCTTTCAGCAGTGGCAGTATGAGCTGGGCATGATGATTGCAGGTCTGCCGGTGAATATCATTATCTCCGATGCTGTTTCTGCTCAACCGCTGACAGTTGCGGTGCATTGCCTGAACCCGCTGGGTTATCGATTTGCTTGTTTGCTGGCTGAGTTTGATCAACTGGCTCTGCGGATTTTACAGGCGTATCACTACGGACTTATTTCGATGAAAGAAAAGAAAGCGCGGCTGCATTATTGCAGCCATCAAATACGCCGTATCTTTGCGGTTGTAGTACAGTATCATCTGGAATAGAAGTAAGTTTGACTCATTAAATAATGTATTAATACAATGAGTTGACAGTA