Homologs in group_3114

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
EHELCC_10835 EHELCC_10835 100.0 Morganella morganii S2 - TIGR03761 family integrating conjugative element protein
NLDBIP_11180 NLDBIP_11180 100.0 Morganella morganii S4 - TIGR03761 family integrating conjugative element protein
LHKJJB_10175 LHKJJB_10175 100.0 Morganella morganii S3 - TIGR03761 family integrating conjugative element protein
HKOGLL_16340 HKOGLL_16340 100.0 Morganella morganii S5 - TIGR03761 family integrating conjugative element protein
PMI_RS12970 PMI_RS12970 100.0 Proteus mirabilis HI4320 - TIGR03761 family integrating conjugative element protein

Distribution of the homologs in the orthogroup group_3114

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3114

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella morganii S1
Locus tag FBDBKF_19740
Feature type CDS
Gene -
Product TIGR03761 family integrating conjugative element protein
Location 12066 - 12770 (strand: 1)
Length 705 (nucleotides) / 234 (amino acids)

Contig

Accession contig_43
Length 19499 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3114
Orthogroup size 6
N. genomes 6

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Genomic region

Domains

PF08900 Transcriptional regulator AcaB

Protein Sequence

MEQNKHSQQLLQAGPLKSTLTLKLHTSYAIRLWEGRVVPNSQNDGDEKKRKWMIPSLPMFISRAGHITDDAKKGYLYAEMWLYQLEQALEQGTRTIQKLLSEVEQQLVQLPAVAVISDISSTSPVDLAIFSKSPVGYKCVWLLVGVDQLALRVLQGEHYGFISRQQRDKVLKLAGYQVRHVTGMAVNYRKYELTRHNLDLNSETYQQASRYLGEIDPDIISGRKRASFLPSLKK

Flanking regions ( +/- flanking 50bp)

GGGGTTGACATTTGTACGGTATGTCAATTTCTCAAAGCAAGGGTATTGTTATGGAACAAAATAAACATTCTCAACAGTTACTTCAGGCTGGCCCTTTAAAGTCAACATTAACACTGAAACTCCATACCAGTTATGCAATCCGGCTATGGGAAGGGCGGGTTGTACCCAACTCTCAGAATGACGGTGACGAAAAAAAGCGTAAATGGATGATCCCCAGTCTTCCGATGTTTATTTCCCGGGCGGGTCATATTACTGATGATGCAAAGAAGGGATACTTATATGCAGAAATGTGGCTGTATCAGCTTGAGCAGGCACTGGAGCAAGGGACTCGGACTATTCAGAAATTACTTTCAGAGGTTGAACAACAATTAGTTCAGTTACCTGCGGTTGCGGTTATTTCGGATATCTCATCAACATCTCCTGTTGACCTGGCGATATTCAGTAAATCTCCTGTTGGTTATAAATGTGTCTGGTTACTCGTCGGGGTTGATCAACTTGCTTTGCGTGTATTGCAGGGAGAGCATTATGGTTTTATTTCCCGTCAGCAACGTGACAAGGTCCTTAAATTAGCGGGCTATCAGGTTCGTCATGTGACAGGGATGGCCGTAAACTACCGGAAATATGAGCTCACCCGTCATAACCTTGATTTAAACAGTGAAACTTATCAACAGGCTTCCCGTTATTTAGGTGAAATTGATCCGGATATCATTTCAGGAAGAAAACGTGCGTCATTTTTACCGTCTTTAAAAAAATAACGAATGTTATTTATATTGGGTTAATTATTTAATAATAAGGAGCTGCAATG