Homologs in group_3547

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4 homologs were identified in 4 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
EHELCC_01900 EHELCC_01900 100.0 Morganella morganii S2 - GP46 protein
NLDBIP_01560 NLDBIP_01560 100.0 Morganella morganii S4 - GP46 protein
LHKJJB_00475 LHKJJB_00475 100.0 Morganella morganii S3 - GP46 protein
HKOGLL_00515 HKOGLL_00515 100.0 Morganella morganii S5 - GP46 protein

Distribution of the homologs in the orthogroup group_3547

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3547

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella morganii S1
Locus tag FBDBKF_18485
Feature type CDS
Gene -
Product GP46 protein
Location 22136 - 22477 (strand: -1)
Length 342 (nucleotides) / 113 (amino acids)
In genomic island GI84

Contig

Accession contig_34
Length 32354 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3547
Orthogroup size 5
N. genomes 5

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Genomic region

Protein Sequence

MAKSPAERKAAQRKRQRGAGMVIPQWQIEAEEHEMIKRNCALRRPGREPYDEAEYIQMLIRNDDARLKRDIAELLQRCCGKCGEVLPVAECCLSGDAECWNTRGWHEMKLKVE

Flanking regions ( +/- flanking 50bp)

CGACAGGGCGCAGGCTATATGCCAAAAGGTGATTGATGAGGAGCGGAACAATGGCTAAATCCCCCGCCGAACGCAAAGCAGCACAGCGTAAACGCCAGCGTGGCGCTGGCATGGTAATCCCGCAGTGGCAGATTGAGGCCGAAGAACATGAGATGATCAAACGCAACTGCGCACTGCGCCGCCCCGGTCGTGAGCCATACGACGAGGCCGAGTATATTCAGATGCTGATACGTAACGATGATGCACGGCTTAAGCGTGATATTGCTGAGTTGTTACAGCGCTGCTGTGGTAAGTGTGGGGAGGTATTGCCGGTCGCTGAGTGCTGTCTGTCCGGTGATGCCGAATGCTGGAACACCAGAGGGTGGCATGAGATGAAATTGAAGGTAGAATGAGGAAAAAATAACACTGATGGGGTATGTATGGCTTTTGATTGGATAGCAGG