Homologs in group_3486

Help

4 homologs were identified in 4 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
EHELCC_10635 EHELCC_10635 100.0 Morganella morganii S2 - TIGR03745 family integrating conjugative element membrane protein
NLDBIP_10980 NLDBIP_10980 100.0 Morganella morganii S4 - TIGR03745 family integrating conjugative element membrane protein
LHKJJB_10375 LHKJJB_10375 100.0 Morganella morganii S3 - TIGR03745 family integrating conjugative element membrane protein
HKOGLL_16540 HKOGLL_16540 100.0 Morganella morganii S5 - TIGR03745 family integrating conjugative element membrane protein

Distribution of the homologs in the orthogroup group_3486

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_3486

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella morganii S1
Locus tag FBDBKF_16825
Feature type CDS
Gene -
Product TIGR03745 family integrating conjugative element membrane protein
Location 43434 - 43781 (strand: -1)
Length 348 (nucleotides) / 115 (amino acids)

Contig

Accession contig_25
Length 47933 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3486
Orthogroup size 5
N. genomes 5

Actions

Genomic region

Domains

PF11190 Protein of unknown function (DUF2976)

Protein Sequence

MFHSLVFFLWRLLPLALLWSAAAYADLPVVEGPKSSADKSFYGQISGYLNDGIVLGGLILAASSMLAVGNAIITTFAEVRDNRATWAKFGMLCVVGVILIVVVVWLASKAATVLL

Flanking regions ( +/- flanking 50bp)

TCTCTGTGCCGGATGATTCCGGCTTTTTTCGTTTGCATAAGGACATCACCATGTTTCATTCCCTGGTTTTTTTTCTGTGGCGGCTGCTCCCGCTGGCACTGCTCTGGAGTGCGGCCGCGTATGCGGATCTGCCGGTCGTCGAAGGCCCGAAAAGCAGTGCCGATAAATCGTTTTACGGCCAGATATCCGGTTATCTCAATGACGGGATAGTGCTCGGCGGGCTGATTCTGGCGGCATCGTCGATGCTGGCCGTCGGCAACGCCATCATCACCACTTTTGCTGAGGTGCGGGATAACCGCGCGACCTGGGCGAAGTTCGGGATGCTCTGCGTGGTCGGGGTGATCCTGATTGTCGTGGTGGTCTGGCTGGCGTCCAAAGCCGCCACTGTGCTGCTGTGAGGGACTATGGCGACGATTGAATTTATGCCGGATCGGCTGAATGCGGAGCC