Homologs in group_3475

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4 homologs were identified in 4 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
EHELCC_10785 EHELCC_10785 100.0 Morganella morganii S2 araC AraC family transcriptional regulator
NLDBIP_11130 NLDBIP_11130 100.0 Morganella morganii S4 araC AraC family transcriptional regulator
LHKJJB_10225 LHKJJB_10225 100.0 Morganella morganii S3 araC AraC family transcriptional regulator
HKOGLL_16390 HKOGLL_16390 100.0 Morganella morganii S5 araC AraC family transcriptional regulator

Distribution of the homologs in the orthogroup group_3475

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3475

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella morganii S1
Locus tag FBDBKF_16675
Feature type CDS
Gene araC
Product AraC family transcriptional regulator
Location 17876 - 18340 (strand: -1)
Length 465 (nucleotides) / 154 (amino acids)

Contig

Accession contig_25
Length 47933 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3475
Orthogroup size 5
N. genomes 5

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Genomic region

Protein Sequence

MTTTLNPDHPLVSISFTADTDFTVLADHCALFAEVLIESADPVQKLALCGRISTGLSLLKSRLADPIAPHLVECLTTDIPPVTSPPRFNPDSTELCNYCLALTQVLAGQGFGSQTAMHLSWLLYELLDFFKTDLQSPRWLRTAEGTRFLDERTA

Flanking regions ( +/- flanking 50bp)

TTAGCCTCTTCGGTGGTGAATATAGAACACCATCTGTTAGAGGATGCCTTATGACAACGACCCTTAACCCCGATCATCCGTTAGTTTCTATTTCCTTCACCGCTGATACTGATTTTACTGTCCTGGCTGACCATTGCGCCCTGTTTGCTGAGGTTTTGATTGAGTCTGCCGACCCGGTGCAAAAACTGGCATTGTGCGGCAGGATAAGCACCGGTCTCTCTCTGCTGAAATCCAGGCTCGCTGATCCCATCGCTCCCCATCTTGTTGAATGTCTGACCACCGATATCCCCCCTGTCACTTCTCCTCCCCGCTTTAATCCCGACAGCACTGAACTCTGCAACTATTGTCTGGCGCTGACGCAGGTTCTGGCAGGGCAGGGATTTGGCTCTCAGACGGCGATGCATCTCAGTTGGCTGTTGTATGAATTACTGGATTTTTTTAAGACAGATTTGCAGTCACCGCGCTGGTTACGGACAGCAGAAGGAACCCGGTTTCTTGATGAAAGGACGGCATGATGCACAACAGGGAGGACAAAATAAAACTATCCGGTACACCGGATGGTTGG