Homologs in group_3940

Help

0 homologs were identified in 0 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product

Distribution of the homologs in the orthogroup group_3940

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_3940

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella morganii S1
Locus tag FBDBKF_16600
Feature type CDS
Gene -
Product Uracil-DNA glycosylase-like domain-containing protein
Location 1549 - 2067 (strand: -1)
Length 519 (nucleotides) / 172 (amino acids)

Contig

Accession contig_25
Length 47933 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3940
Orthogroup size 1
N. genomes 1

Actions

Genomic region

Protein Sequence

MSRFLPFIGRQYEDSIYGVKVMILGLSHYGDPEDAYPEFTRDVINENAYSPGNRFFTLLTNLLRLSKDAPDDTERRAAWEQVAFYNYIQDIVGITSRISPTPEMWDEARQPFLNVVKELKPQIIIVLGTQLWDQLPEIDGIEWCWVKHPSSGSFSYDEAFSNFKKALENIRK

Flanking regions ( +/- flanking 50bp)

GCCGCCATTTAACCCCTCTGCGGGAGTAATAATGCAACTGAGGAAAAAAGATGAGCAGGTTTTTACCTTTTATTGGCCGTCAGTATGAAGACAGTATCTACGGGGTCAAAGTGATGATTCTCGGATTATCTCATTATGGCGACCCGGAGGATGCATATCCGGAATTCACAAGAGACGTTATCAATGAGAATGCGTACTCACCGGGAAACCGGTTTTTCACACTTCTGACTAATTTACTGCGTTTATCCAAAGACGCGCCGGATGATACTGAACGAAGGGCGGCATGGGAGCAGGTGGCTTTTTATAACTACATACAGGATATCGTCGGGATAACAAGCCGGATATCGCCGACACCAGAAATGTGGGATGAGGCCAGGCAGCCATTTTTAAACGTTGTGAAAGAATTAAAACCGCAAATCATTATCGTCCTGGGGACCCAGCTGTGGGACCAGCTACCGGAGATAGACGGTATTGAGTGGTGCTGGGTAAAACACCCCAGTTCAGGAAGCTTTTCCTATGATGAAGCGTTCAGCAATTTCAAAAAAGCGCTTGAAAATATAAGAAAATAAACGGGATCCCGACTGGTTCAGTGAAGAACCGTATTGTCAGTGATCTCTTC