Homologs in group_2976

Help

5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
EHELCC_16360 EHELCC_16360 100.0 Morganella morganii S2 yibQ Uncharacterized conserved protein YibQ, putative polysaccharide deacetylase 2 family
NLDBIP_16980 NLDBIP_16980 100.0 Morganella morganii S4 yibQ Uncharacterized conserved protein YibQ, putative polysaccharide deacetylase 2 family
LHKJJB_16900 LHKJJB_16900 100.0 Morganella morganii S3 yibQ Uncharacterized conserved protein YibQ, putative polysaccharide deacetylase 2 family
HKOGLL_16940 HKOGLL_16940 100.0 Morganella morganii S5 yibQ Uncharacterized conserved protein YibQ, putative polysaccharide deacetylase 2 family
PMI_RS15720 PMI_RS15720 58.7 Proteus mirabilis HI4320 - divergent polysaccharide deacetylase family protein

Distribution of the homologs in the orthogroup group_2976

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_2976

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P37691 4.9e-93 283 49 1 275 3 yibQ Uncharacterized protein YibQ Escherichia coli (strain K12)
P44863 5.04e-57 189 41 0 236 1 HI_0755 Uncharacterized protein HI_0755 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)

  • Number of RefSeq hits:

General

Source Morganella morganii S1
Locus tag FBDBKF_16325
Feature type CDS
Gene yibQ
Product Uncharacterized conserved protein YibQ, putative polysaccharide deacetylase 2 family
Location 52942 - 54015 (strand: -1)
Length 1074 (nucleotides) / 357 (amino acids)
In genomic island -

Contig

Accession contig_23
Length 63965 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2976
Orthogroup size 6
N. genomes 6

Actions

Genomic region

Domains

PF04748 Divergent polysaccharide deacetylase

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG2861 Carbohydrate transport and metabolism (G) G Uncharacterized conserved protein YibQ, putative polysaccharide deacetylase 2 family

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K09798 uncharacterized protein - -

Protein Sequence

MTYRQKTKNIVLTSLLFITSSLITFSAAAAQLAIVIDDFGYRKQDDNRILELPPQVSIAILPNSPFGKEMAEKAHRQGREILIHMPMAPISKQPLERDTLRPSMSAAEIDTLIKAAIARVPYATGMNNHMGSAMTSDLTAMQHVMASLSGSGFYFLDSVTIGSTKATQAAQGTPVRVLRRQVFLDNVQTEEETRKQLNRAVALARKQGSVIAIGHPHPSTVRALHKLIPQLPPDIELVSPGYMLTHAGKPSAVKPQPEKPVVPVKPVVKEKPWLTPMTEQCEGKAEIGGEFYTNYINLLTEALLRDQMNGKVAEVLLSVRMALPQPDTAPPAAKESVSTDLKAAEKVPAEPAAETQR

Flanking regions ( +/- flanking 50bp)

GCCAGGGACGGACGGTTAACCCGCAGCCCTGGCTGGGGAGATAGCACACAGTGACTTACCGGCAGAAAACCAAAAATATCGTACTGACTTCGTTACTTTTTATCACTTCGTCACTGATAACGTTTTCTGCCGCTGCAGCGCAGCTCGCCATTGTGATCGATGATTTCGGTTACCGCAAACAGGATGATAACCGCATCCTGGAGCTGCCGCCGCAGGTCTCCATTGCTATCCTGCCGAACTCCCCGTTCGGTAAAGAAATGGCGGAGAAAGCACACCGCCAGGGCCGTGAAATTCTTATCCATATGCCGATGGCACCGATCAGCAAACAGCCGCTGGAGCGCGATACTCTGCGCCCGTCCATGAGTGCCGCAGAAATTGATACCCTGATTAAAGCCGCGATTGCCCGGGTGCCGTATGCCACCGGCATGAATAACCATATGGGCAGCGCGATGACCTCTGATCTGACCGCCATGCAGCATGTGATGGCGTCTCTCTCCGGCTCCGGTTTTTATTTCCTCGACAGTGTGACCATCGGCAGCACCAAAGCGACACAGGCTGCACAGGGAACACCGGTTCGCGTACTGCGCCGCCAGGTTTTTCTGGATAATGTGCAGACAGAGGAAGAGACCCGCAAGCAACTGAACCGGGCTGTTGCTCTGGCACGCAAACAGGGGTCGGTGATCGCTATCGGGCACCCGCATCCGTCGACGGTCCGCGCACTGCATAAACTCATCCCGCAACTGCCGCCGGATATTGAGCTGGTATCGCCGGGATATATGCTGACGCATGCCGGTAAACCATCTGCCGTGAAACCGCAGCCGGAGAAACCGGTCGTGCCGGTCAAACCGGTGGTGAAGGAAAAACCGTGGCTGACACCAATGACTGAGCAGTGTGAGGGTAAAGCAGAAATCGGCGGGGAGTTCTACACCAACTATATCAATCTGCTGACGGAAGCACTCCTGAGAGATCAGATGAACGGCAAAGTGGCGGAAGTCCTGTTATCCGTCCGCATGGCGCTACCGCAGCCGGATACCGCGCCGCCTGCGGCAAAAGAGTCAGTCAGCACTGACCTGAAGGCCGCGGAAAAAGTACCGGCTGAACCGGCGGCAGAGACTCAGCGATAGCAGGACCGGGATAACCAGCCCGGCCGACAGTATGATCAGATTATCACCGG