Homologs in group_2958

Help

5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
EHELCC_16110 EHELCC_16110 100.0 Morganella morganii S2 rhaT Permease of the drug/metabolite transporter (DMT) superfamily
NLDBIP_17230 NLDBIP_17230 100.0 Morganella morganii S4 rhaT Permease of the drug/metabolite transporter (DMT) superfamily
LHKJJB_17150 LHKJJB_17150 100.0 Morganella morganii S3 rhaT Permease of the drug/metabolite transporter (DMT) superfamily
HKOGLL_16690 HKOGLL_16690 100.0 Morganella morganii S5 rhaT Permease of the drug/metabolite transporter (DMT) superfamily
PMI_RS10990 PMI_RS10990 60.0 Proteus mirabilis HI4320 - EamA family transporter

Distribution of the homologs in the orthogroup group_2958

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_2958

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P39649 6.2e-31 120 30 5 300 3 ywfM Uncharacterized transporter YwfM Bacillus subtilis (strain 168)
P0AA67 3.38e-06 51 27 8 273 1 rhtA Threonine/homoserine exporter RhtA Escherichia coli (strain K12)
P0AA68 3.38e-06 51 27 8 273 3 rhtA Threonine/homoserine exporter RhtA Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0AA69 3.38e-06 51 27 8 273 3 rhtA Threonine/homoserine exporter RhtA Escherichia coli O157:H7
P31437 1.28e-05 49 21 6 305 1 yicL Uncharacterized inner membrane transporter YicL Escherichia coli (strain K12)
O33787 4.56e-05 48 23 8 305 3 yicL Uncharacterized inner membrane transporter YicL Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
F8JJ22 5.45e-05 47 26 3 171 3 besF Probable terminal-alkyne amino-acid exporter Streptantibioticus cattleyicolor (strain ATCC 35852 / DSM 46488 / JCM 4925 / NBRC 14057 / NRRL 8057)
P38943 0.000116 47 29 3 123 3 CKL_3017 Uncharacterized transporter CKL_3017 Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680)
O28720 0.000308 45 26 6 181 3 AF_1552 Uncharacterized transporter AF_1552 Archaeoglobus fulgidus (strain ATCC 49558 / DSM 4304 / JCM 9628 / NBRC 100126 / VC-16)

  • Number of RefSeq hits:

General

Source Morganella morganii S1
Locus tag FBDBKF_16075
Feature type CDS
Gene rhaT
Product Permease of the drug/metabolite transporter (DMT) superfamily
Location 2306 - 3253 (strand: -1)
Length 948 (nucleotides) / 315 (amino acids)

Contig

Accession contig_23
Length 63965 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2958
Orthogroup size 6
N. genomes 6

Actions

Genomic region

Domains

PF00892 EamA-like transporter family

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0697 Carbohydrate transport and metabolism (G)
Amino acid transport and metabolism (E)
General function prediction only (R)		 GER Permease of the drug/metabolite transporter (DMT) superfamily

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K03298 drug/metabolite transporter, DME family - -

Protein Sequence

MIQTPKGHFAGIAVIILASFLWGTTGVSATFAPDVSPVAIGAAAMGFGGLLQAAIAITPIRRSLGTFRQQWHLLLLGAVAVAVYPLAFYGSMRLAGVTIGTVVSIGTAPVLSAIIEIIMDGARMTLRWLSGAVLGLTGIALLSLSGGTEQIAAADASATLTGVILGLLAAFTYALYSWAARRLMQRNIPSRAAMGGIFGIGGLLLMPVLALYGAPFLDSWQNAAVGIYMACVPMFLGYVCFGYALARIPASTATTITLLEPVVAAALAAIIVGEQLTTAGWAGVALIFTCLVCITLPARRKAQAVNVAVVKPNQC

Flanking regions ( +/- flanking 50bp)

GCACGGGTATTACAGGCTGCCGCCATGGCAAAAACCATGCTGGAGGCGCTGTGATCCAGACACCCAAAGGCCACTTTGCCGGAATTGCCGTCATTATCCTGGCCTCCTTCTTATGGGGAACCACCGGGGTTTCTGCCACCTTCGCACCGGATGTCAGTCCTGTTGCTATCGGTGCTGCCGCCATGGGTTTCGGCGGGTTGCTCCAGGCCGCGATTGCCATCACCCCTATCCGCCGCAGCCTCGGTACTTTCCGGCAGCAATGGCATTTGCTGTTATTGGGTGCCGTTGCTGTTGCCGTATATCCGCTCGCCTTTTACGGCTCAATGCGACTGGCCGGGGTGACTATCGGCACCGTAGTATCGATCGGAACGGCACCGGTTTTATCGGCAATTATTGAAATTATCATGGACGGAGCCCGCATGACACTGCGCTGGTTGAGCGGTGCAGTACTCGGCCTGACAGGTATTGCGCTTCTTTCCCTTTCCGGCGGCACGGAACAGATTGCTGCAGCGGATGCATCCGCCACACTGACAGGTGTCATACTGGGATTACTCGCCGCCTTTACTTATGCGCTTTATTCCTGGGCCGCGCGCCGCCTGATGCAGCGCAACATTCCGTCACGGGCAGCTATGGGCGGTATTTTCGGGATCGGGGGATTACTGCTGATGCCAGTATTAGCACTTTACGGCGCACCATTCCTGGATTCGTGGCAGAACGCCGCAGTCGGCATTTACATGGCTTGTGTACCGATGTTTCTGGGCTATGTCTGTTTCGGTTATGCACTGGCACGTATTCCCGCCAGTACCGCCACCACAATTACACTGCTGGAACCGGTTGTCGCCGCCGCACTCGCCGCCATTATTGTCGGCGAACAACTCACCACCGCCGGCTGGGCCGGAGTCGCACTGATTTTCACCTGTCTGGTCTGTATTACACTACCTGCCCGGCGTAAGGCACAGGCAGTGAATGTGGCTGTCGTTAAACCGAATCAGTGTTAGGGTTTGTCAGCTTACTTCCCAATACAGAAACTAAAAATGTAAAACCACTC