Homologs in group_2129

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
EHELCC_18600 EHELCC_18600 100.0 Morganella morganii S2 priC Primosomal replication protein N''
NLDBIP_17430 NLDBIP_17430 100.0 Morganella morganii S4 priC Primosomal replication protein N''
LHKJJB_17230 LHKJJB_17230 100.0 Morganella morganii S3 priC Primosomal replication protein N''
HKOGLL_17165 HKOGLL_17165 100.0 Morganella morganii S5 priC Primosomal replication protein N''
F4V73_RS16315 F4V73_RS16315 81.2 Morganella psychrotolerans - primosomal replication protein
PMI_RS00660 PMI_RS00660 46.1 Proteus mirabilis HI4320 - primosomal replication protein

Distribution of the homologs in the orthogroup group_2129

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2129

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P23862 4.04e-25 98 36 2 176 1 priC Primosomal replication protein N'' Escherichia coli (strain K12)

  • Number of RefSeq hits:

General

Source Morganella morganii S1
Locus tag FBDBKF_15995
Feature type CDS
Gene priC
Product Primosomal replication protein N''
Location 52724 - 53269 (strand: -1)
Length 546 (nucleotides) / 181 (amino acids)

Contig

Accession contig_22
Length 68748 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2129
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF07445 Primosomal replication protein priC

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3923 Replication, recombination and repair (L) L Primosomal replication protein N''

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K04067 primosomal replication protein N'' Homologous recombination -

Protein Sequence

MNTRQLLQALRQKISALETQIAPIADRELSQRRFDDTLFAARNKTLRLCMDELLHHTDQLEQCADENRAEQVRFLAEKIVAQIAALNREAATQALRQKEQSYVKRDSQVDLYQRLAQHQDYERRLAQMTDDRELALGRAQTFAEQQKLQKELAALAGRLVRCRQALQRIERQIERHDGTEF

Flanking regions ( +/- flanking 50bp)

CTCAACAGATCCTCAACGACGATCCCGGGCACATTTCACTGAGGCGGATAATGAACACCAGACAATTGTTACAGGCGCTGCGACAGAAAATCAGCGCGCTGGAAACACAGATTGCCCCGATAGCAGACCGGGAACTGAGCCAGCGCCGCTTCGATGATACCCTGTTCGCCGCCCGTAATAAAACCCTGCGCCTGTGCATGGATGAACTACTGCACCATACTGACCAGCTTGAGCAGTGTGCGGACGAAAACAGGGCTGAGCAGGTACGTTTTCTGGCAGAAAAAATTGTCGCCCAGATTGCGGCACTGAACCGCGAGGCCGCCACTCAGGCGCTGCGGCAGAAAGAACAGAGCTATGTGAAACGGGACAGCCAGGTGGATCTGTATCAGCGTCTGGCGCAGCATCAGGATTATGAGCGCCGCCTGGCTCAGATGACCGATGACCGCGAACTGGCACTCGGCCGCGCACAAACGTTTGCCGAGCAGCAAAAGCTGCAGAAAGAGCTGGCGGCACTGGCCGGGCGCCTTGTCCGCTGCCGTCAGGCTTTACAGCGCATAGAGCGGCAGATTGAACGCCACGACGGCACCGAATTTTAATCAGATACCGGATACCCCATGAGTCTTGAAAATGCCCCCGATGAGGTAAA