Homologs in group_2061

Help

6 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
EHELCC_11075 EHELCC_11075 100.0 Morganella morganii S2 - YD repeat-containing protein
NLDBIP_11420 NLDBIP_11420 100.0 Morganella morganii S4 - YD repeat-containing protein
LHKJJB_11280 LHKJJB_11280 100.0 Morganella morganii S3 - YD repeat-containing protein
HKOGLL_09890 HKOGLL_09890 100.0 Morganella morganii S5 - YD repeat-containing protein
F4V73_RS04510 F4V73_RS04510 23.3 Morganella psychrotolerans - hypothetical protein
F4V73_RS12275 F4V73_RS12275 63.0 Morganella psychrotolerans - hypothetical protein

Distribution of the homologs in the orthogroup group_2061

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_2061

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella morganii S1
Locus tag FBDBKF_15170
Feature type CDS
Gene -
Product YD repeat-containing protein
Location 43982 - 44863 (strand: -1)
Length 882 (nucleotides) / 293 (amino acids)
In genomic island -

Contig

Accession contig_20
Length 84833 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2061
Orthogroup size 7
N. genomes 6

Actions

Genomic region

Protein Sequence

MISNLFFDLNSPPKSLFVFTGLFFLLFSVYSYADCSLYSDETRSSNFIILGAGMINGPVKSVITTAHSPDNKNSNIMINGQYDLTPCGELSYFSLEVTEHYPGLQNRMYSEGKKTEQGYTLLFTSQLHGSGKAPVTLIHARSRLFYNNQKQIVRAESESNSGGNTQKSHMETDFFYENSLISHAVSTGDSADTGGEIRYDWRQDRQINAIMSQSNGLPQLNYEFAYNDDGQVIRQTQTQHTPLGRVKAIYICQQTDTYGNCEKALWQSISEGNQANNIIVINTAIVTSDYRYY

Flanking regions ( +/- flanking 50bp)

TATCAGGCCACTTTTGTTATAACTATAAGAAACATCCGGGAGGCCATACGGTGATAAGTAACCTGTTCTTCGATTTAAATTCACCACCAAAATCCCTCTTTGTTTTTACGGGATTATTTTTTCTGTTATTCAGTGTTTATTCTTACGCAGACTGCAGTTTGTATTCAGATGAGACACGCAGCAGTAACTTTATTATTCTGGGTGCCGGTATGATCAACGGCCCGGTAAAATCCGTCATCACAACAGCACATTCCCCGGACAACAAAAACAGCAATATTATGATTAACGGGCAATATGACCTGACGCCGTGTGGTGAACTGAGTTACTTTTCACTGGAAGTTACCGAGCACTACCCGGGGTTGCAAAATCGGATGTATTCCGAAGGAAAGAAGACGGAACAGGGATATACCTTATTATTCACGTCACAACTGCATGGCAGCGGAAAAGCACCCGTCACGCTGATTCATGCCCGAAGCCGCCTTTTCTATAATAATCAGAAGCAAATCGTCCGTGCCGAATCTGAAAGTAACAGTGGCGGCAATACCCAAAAATCGCATATGGAAACCGATTTTTTTTATGAAAACAGTTTAATCTCACATGCGGTATCCACAGGGGATTCCGCGGACACCGGCGGTGAAATCCGCTACGACTGGCGTCAGGATCGGCAGATAAATGCGATTATGTCCCAAAGTAACGGACTTCCTCAGCTGAACTATGAATTTGCGTATAATGATGATGGTCAGGTTATCCGGCAGACACAGACACAACATACGCCGCTGGGCCGGGTAAAAGCTATTTATATCTGCCAGCAGACAGATACTTACGGGAATTGTGAAAAAGCACTCTGGCAGAGTATCTCTGAAGGGAATCAGGCCAATAATATTATTGTGATAAATACCGCTATTGTGACATCAGACTATCGTTATTACTGATTCCGTATTGTTGTCCTGCCATTAATAAACAAAGGCGCTTTAAGGCGCCT