Homologs in group_3934

Help

0 homologs were identified in 0 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product

Distribution of the homologs in the orthogroup group_3934

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_3934

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q47138 0.000331 47 37 3 87 5 ydfE Putative uncharacterized protein YdfE Escherichia coli (strain K12)

  • Number of RefSeq hits:

General

Source Morganella morganii S1
Locus tag FBDBKF_12920
Feature type CDS
Gene -
Product Exodeoxyribonuclease VIII
Location 84849 - 86849 (strand: 1)
Length 2001 (nucleotides) / 666 (amino acids)

Contig

Accession contig_15
Length 114235 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3934
Orthogroup size 1
N. genomes 1

Actions

Genomic region

Protein Sequence

MTNYICAFNPIDAALKDGAVTVAITISANSEKMARAMAAVMLEETYPENTGKFDVAAAIVCEAQAGKPAPAGDSFDEHFAKEYEFNGTDWQKREEKMVVFAKTAPVVRIAAILLYGKTQFTRSEYLKAVDFVHIGDEYPLLRNIAKGVAATPGVSLLNEQELEALVNFVMQQAPDSITEKEAQKLAEKYLYPAAEPATGQLPITEHKQRDFDHNYATLDQEIALALLPGDFSPWEIQPSKLTAAKKLISDEDDSWRRWSTEFRIIPTALQIPRETVFAVVREGKELPDLISDAVARKQFVADRIGITPAESSHDQETGRSGPDITEDKPPVAAKQEKTKRTRTKKADKQAEKPAPEVAANDEATTTAQTPEPVHAEEPATDDFRSRAEVIAEVLADTDNLSIWKQVQRTDPRFTKPLEGAGFQGTSINSNYMFMRATEIFGPIGEGWGYEVVEEKFLDGKPLTEPVLENNKQVALRYLRDADGSLFCEQNHSIKIQFWYRSKDGKCCYFESYGATPYRYQTQYGIKVDSEVIKKSLTDAIKKALSMLGFSSDVFMGMHDNPEYLIKNKLEFEIKAASENAEDSVRIREELDEKFTRNTETMRTAVTQNELRGIASTLTREISAHLNSAKSRGDNEYAGYLSGRLRRLTEIEKECLTKLTEKQEADQ

Flanking regions ( +/- flanking 50bp)

TAATTTCCAAAGACGACGAAGCATTACCTTACTGACCAGAGGCAAGACCAATGACCAATTATATCTGTGCATTTAATCCCATAGATGCGGCACTTAAAGACGGTGCTGTAACTGTAGCAATCACTATTTCCGCCAATTCAGAAAAGATGGCCAGAGCAATGGCAGCGGTGATGCTGGAAGAAACTTACCCGGAAAATACGGGAAAATTTGATGTGGCGGCAGCAATAGTCTGCGAAGCTCAGGCAGGCAAACCAGCACCGGCCGGTGATAGTTTTGATGAACATTTTGCCAAAGAGTACGAGTTCAACGGCACCGACTGGCAGAAGCGTGAAGAAAAAATGGTCGTATTTGCAAAAACAGCACCTGTTGTGCGTATTGCCGCCATCCTGTTGTACGGGAAAACGCAATTTACCCGTAGCGAGTACCTCAAAGCTGTCGATTTTGTTCATATCGGTGACGAATACCCGCTGCTCCGGAATATAGCCAAAGGTGTCGCGGCCACGCCCGGGGTATCCCTGCTTAACGAGCAGGAACTGGAAGCGCTGGTGAATTTTGTCATGCAACAGGCACCGGACAGCATCACCGAAAAAGAGGCACAGAAGCTGGCAGAAAAATACTTATACCCTGCTGCTGAACCAGCCACAGGGCAGCTCCCGATCACAGAACACAAGCAACGCGATTTTGACCACAACTATGCAACACTGGATCAGGAAATAGCTCTCGCCCTTCTTCCCGGTGATTTTTCACCGTGGGAAATACAGCCAAGCAAACTCACCGCTGCGAAAAAACTGATCAGTGATGAAGATGACAGCTGGCGGCGCTGGTCTACTGAGTTCCGTATAATCCCGACCGCATTGCAGATCCCGCGTGAAACAGTCTTTGCTGTCGTACGTGAAGGAAAAGAATTACCTGACCTGATAAGCGATGCGGTAGCCCGTAAACAGTTTGTGGCTGACCGTATTGGCATAACGCCGGCAGAAAGCAGTCATGACCAGGAAACAGGCCGGTCCGGTCCGGATATTACGGAAGATAAACCCCCCGTAGCAGCAAAGCAGGAAAAGACCAAGCGCACACGTACTAAAAAAGCAGATAAACAGGCAGAGAAACCAGCTCCGGAAGTAGCAGCCAACGATGAAGCGACCACCACGGCGCAGACACCAGAACCGGTTCATGCCGAGGAACCCGCTACTGATGACTTCCGCAGCCGCGCCGAGGTGATTGCCGAGGTTCTGGCAGACACGGACAATCTGAGTATCTGGAAGCAGGTACAGCGCACAGATCCACGCTTTACCAAGCCTTTAGAGGGCGCGGGATTTCAGGGTACCAGCATTAACAGTAACTACATGTTTATGCGTGCTACCGAAATTTTCGGACCGATCGGTGAGGGCTGGGGCTATGAGGTGGTAGAAGAAAAATTCCTGGACGGCAAACCGCTGACTGAACCTGTTCTGGAAAACAACAAACAGGTTGCTCTGCGTTACCTGCGTGACGCAGACGGTTCTCTGTTCTGCGAACAAAATCATTCAATAAAAATCCAGTTTTGGTACCGCAGCAAAGATGGCAAGTGCTGTTATTTTGAAAGCTACGGCGCGACACCATACCGCTATCAGACCCAATACGGCATAAAAGTTGATAGTGAAGTCATCAAAAAGTCACTGACAGACGCGATTAAAAAAGCGCTGTCAATGCTCGGATTCTCTTCTGATGTGTTTATGGGTATGCACGATAACCCTGAATACCTCATCAAAAATAAGCTGGAATTTGAAATCAAAGCGGCCAGCGAGAACGCAGAGGACAGCGTCCGGATCCGCGAAGAACTGGATGAAAAATTCACCCGTAACACGGAAACCATGCGTACCGCAGTTACACAGAACGAATTACGCGGTATCGCATCCACCCTTACCCGCGAAATATCCGCACATCTTAACAGCGCCAAATCGCGCGGTGACAACGAATATGCAGGATACCTGTCCGGCCGCCTGCGCCGCCTGACAGAAATTGAGAAAGAGTGTTTAACCAAACTGACTGAAAAACAAGAGGCAGACCAATGAGTACAACCGCAATCGCATTAGCCGCAGACTATGAAAAGCTGCAACGACTG