Homologs in group_3930

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0 homologs were identified in 0 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product

Distribution of the homologs in the orthogroup group_3930

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3930

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P76064 0.000174 42 35 4 102 4 ydaT Uncharacterized protein YdaT Escherichia coli (strain K12)

  • Number of RefSeq hits:

General

Source Morganella morganii S1
Locus tag FBDBKF_12890
Feature type CDS
Gene ydaT
Product Bacterial toxin YdaT domain-containing protein
Location 81901 - 82353 (strand: -1)
Length 453 (nucleotides) / 150 (amino acids)

Contig

Accession contig_15
Length 114235 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3930
Orthogroup size 1
N. genomes 1

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Genomic region

Domains

PF06254 Bacterial toxin ydaT

Protein Sequence

MMNNNQIIKDEIELWAAEKGQEHVAIEISRAHFLILCGDKPSRLYPIEDGAGNADWKAINNNRQQIFRWLRGNSPAADRKFSELIPAIKIALPADRLARVNGDESVNYLASLAIKEFAAAISETLLGSRDMSQYISKAVTALNAMRMTSV

Flanking regions ( +/- flanking 50bp)

CAGTTAAAAAACTGATTATTCATAATCAATTTCGCGACAGGAGACGCAAGATGATGAATAACAACCAAATAATTAAGGATGAGATTGAATTATGGGCGGCAGAGAAGGGACAGGAGCATGTCGCAATCGAAATTAGCAGGGCGCATTTTTTAATACTGTGTGGTGATAAACCGTCACGCCTGTACCCGATAGAAGACGGGGCCGGTAACGCAGATTGGAAAGCGATTAATAACAACAGGCAGCAAATTTTCCGTTGGTTGCGCGGTAATTCTCCGGCAGCAGACAGAAAGTTCAGTGAGCTGATCCCGGCAATCAAAATTGCATTACCTGCTGACCGGTTGGCGCGGGTTAACGGGGATGAGTCAGTTAATTACCTGGCTTCCCTGGCAATCAAAGAATTTGCCGCGGCAATCAGCGAAACACTTTTAGGCAGTCGTGACATGTCACAGTACATATCAAAAGCAGTAACCGCATTAAATGCGATGCGCATGACCAGCGTATGAGAAAGAGGCAAAGACCAATGCTGAATACAACTGAAAAAATCACCTACCGC