Homologs in group_1677

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
EHELCC_17630 EHELCC_17630 100.0 Morganella morganii S2 tpd Uncharacterized conserved protein probably involved in high-affinity Fe2+ transport
NLDBIP_19300 NLDBIP_19300 100.0 Morganella morganii S4 tpd Uncharacterized conserved protein probably involved in high-affinity Fe2+ transport
LHKJJB_18070 LHKJJB_18070 100.0 Morganella morganii S3 tpd Uncharacterized conserved protein probably involved in high-affinity Fe2+ transport
HKOGLL_19010 HKOGLL_19010 100.0 Morganella morganii S5 tpd Uncharacterized conserved protein probably involved in high-affinity Fe2+ transport
F4V73_RS07985 F4V73_RS07985 95.7 Morganella psychrotolerans - iron transporter
PMI_RS00855 PMI_RS00855 75.0 Proteus mirabilis HI4320 - iron transporter

Distribution of the homologs in the orthogroup group_1677

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1677

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q8YBL4 1.91e-63 196 57 3 170 3 BMEII0885 UPF0423 protein BMEII0885 Brucella melitensis biotype 1 (strain ATCC 23456 / CCUG 17765 / NCTC 10094 / 16M)
Q2YK40 1.91e-63 196 57 3 170 3 BAB2_0840 UPF0423 protein BAB2_0840 Brucella abortus (strain 2308)
Q577H1 1.91e-63 196 57 3 170 3 BruAb2_0820 UPF0423 protein BruAb2_0820 Brucella abortus biovar 1 (strain 9-941)
Q8FWR4 1.91e-63 196 57 3 170 3 BRA0381 UPF0423 protein BRA0381/BS1330_II0378 Brucella suis biovar 1 (strain 1330)
P19478 2.71e-23 94 37 8 165 1 tpd 34 kDa membrane antigen Treponema pallidum (strain Nichols)

  • Number of RefSeq hits:

General

Source Morganella morganii S1
Locus tag FBDBKF_11710
Feature type CDS
Gene tpd
Product Uncharacterized conserved protein probably involved in high-affinity Fe2+ transport
Location 129912 - 130466 (strand: 1)
Length 555 (nucleotides) / 184 (amino acids)

Contig

Accession contig_13
Length 135581 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1677
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF10634 Fe2+ transport protein

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3470 Cell wall/membrane/envelope biogenesis (M)
Lipid transport and metabolism (I)		 MI Uncharacterized conserved protein probably involved in high-affinity Fe2+ transport

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K07230 periplasmic iron binding protein - -

Protein Sequence

MRIGMSVAAALLGVVSTSALALEYPLGQPVIKNGMEIQGVYLQPITMAVEGKHEMHHLAADKSDIHLEADIHAIEENPNGFAEGDWIPYLKVDYKVTKLDDPKKAQSGTFMAMVASDGPHYGENLKLDGYGKYRVEYRISPPSMNDNVAFGRHIDKETGVAPWFEPFDVSWDFEYAGTGRKGSY

Flanking regions ( +/- flanking 50bp)

AATGATTATTATTGTCAGCACTATTTGTATAATGACAATGAGGAATCAGCATGCGTATCGGGATGAGTGTGGCAGCAGCATTACTGGGCGTGGTATCAACCTCTGCCTTGGCACTGGAATATCCGCTCGGACAACCTGTTATCAAAAACGGTATGGAGATTCAGGGTGTGTATCTGCAGCCGATTACCATGGCAGTGGAAGGCAAACATGAAATGCATCACCTCGCGGCGGATAAGTCAGACATCCACCTGGAAGCAGATATCCACGCCATTGAGGAAAACCCGAACGGCTTCGCGGAAGGGGATTGGATCCCGTATCTGAAAGTGGATTACAAAGTCACCAAACTGGATGATCCGAAAAAAGCTCAGTCCGGCACCTTTATGGCGATGGTTGCCAGCGACGGCCCGCACTACGGTGAAAACCTGAAACTGGATGGTTACGGTAAATACCGCGTCGAATACCGCATCTCTCCGCCAAGCATGAACGACAACGTGGCTTTCGGTCGCCATATCGATAAAGAAACCGGTGTTGCTCCGTGGTTTGAGCCGTTTGATGTCTCCTGGGACTTCGAGTATGCCGGCACCGGCCGCAAAGGCAGTTACTGAGTTTATTATTTAAGGAGAACAGCAGGCCGGTAACCGCGGTCTGCTGTCCG