Homologs in group_2889

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
EHELCC_17615 EHELCC_17615 100.0 Morganella morganii S2 ygjV YgjV family protein
NLDBIP_19285 NLDBIP_19285 100.0 Morganella morganii S4 ygjV YgjV family protein
LHKJJB_18055 LHKJJB_18055 100.0 Morganella morganii S3 ygjV YgjV family protein
HKOGLL_19025 HKOGLL_19025 100.0 Morganella morganii S5 ygjV YgjV family protein
F4V73_RS07995 F4V73_RS07995 90.7 Morganella psychrotolerans - YgjV family protein

Distribution of the homologs in the orthogroup group_2889

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2889

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P42603 5.94e-56 177 49 0 168 1 ygjV Inner membrane protein YgjV Escherichia coli (strain K12)

  • Number of RefSeq hits:

General

Source Morganella morganii S1
Locus tag FBDBKF_11695
Feature type CDS
Gene ygjV
Product YgjV family protein
Location 128250 - 128768 (strand: 1)
Length 519 (nucleotides) / 172 (amino acids)

Contig

Accession contig_13
Length 135581 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2889
Orthogroup size 6
N. genomes 6

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Genomic region

Domains

PF10688 Bacterial inner membrane protein

Protein Sequence

MDYLYYAGQGLGIVAFIIGTTVFVQRNERKLKIRLSIYTAIMASHFFLLGAYPAGISATLNSIRTYVSISHRQRWVLWLFVSLTLVLAVPNIRTWQEVLPVTGTLMSTFAFFLLTGLRMRYVIWCSTACWVVYNAWLGTVGGTLIESTFLVINGWAIFRFRRLIKQGINPFS

Flanking regions ( +/- flanking 50bp)

TGGCAGCACAATAATTAAAACCATTCAGCATGTGATTACGGCAGGGGAAGATGGACTATCTGTATTACGCAGGGCAGGGGCTCGGTATTGTTGCGTTTATTATCGGCACGACGGTTTTTGTCCAGCGCAATGAGCGGAAGCTCAAAATCCGGTTATCAATTTACACTGCCATTATGGCATCCCACTTTTTTCTGCTCGGTGCATATCCCGCCGGGATCAGTGCCACGCTCAACAGTATCCGGACTTATGTGTCTATCAGCCATCGTCAGCGTTGGGTGCTCTGGTTATTTGTTTCACTGACACTGGTTCTGGCGGTGCCTAATATCCGTACCTGGCAGGAAGTGCTGCCGGTAACGGGCACCCTGATGAGCACCTTTGCGTTTTTTCTGCTGACGGGATTGCGTATGCGGTATGTGATCTGGTGTTCAACAGCCTGCTGGGTGGTGTATAACGCCTGGCTGGGAACGGTCGGCGGCACACTGATTGAATCGACGTTTCTGGTGATCAACGGCTGGGCGATTTTCCGTTTCCGGCGTCTGATAAAACAGGGAATTAATCCGTTCAGTTAAGCGGTTACGGCTGCTCATCCGGGGGGAGCGTGTCTTCCGGATCATCCGGA