Homologs in group_1550

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
EHELCC_04840 EHELCC_04840 100.0 Morganella morganii S2 lptE LPS assembly lipoprotein LptE
NLDBIP_04840 NLDBIP_04840 100.0 Morganella morganii S4 lptE LPS assembly lipoprotein LptE
LHKJJB_13790 LHKJJB_13790 100.0 Morganella morganii S3 lptE LPS assembly lipoprotein LptE
HKOGLL_12745 HKOGLL_12745 100.0 Morganella morganii S5 lptE LPS assembly lipoprotein LptE
F4V73_RS00295 F4V73_RS00295 88.0 Morganella psychrotolerans lptE LPS assembly lipoprotein LptE
PMI_RS02130 PMI_RS02130 60.4 Proteus mirabilis HI4320 lptE LPS assembly lipoprotein LptE

Distribution of the homologs in the orthogroup group_1550

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1550

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q7N756 4.3e-76 228 70 1 172 3 lptE LPS-assembly lipoprotein LptE Photorhabdus laumondii subsp. laumondii (strain DSM 15139 / CIP 105565 / TT01)
C6DBW7 4.38e-71 216 57 3 187 3 lptE LPS-assembly lipoprotein LptE Pectobacterium carotovorum subsp. carotovorum (strain PC1)
Q6D7L7 5.45e-71 216 62 3 172 3 lptE LPS-assembly lipoprotein LptE Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672)
Q2NUU8 4.96e-62 193 52 3 179 3 lptE LPS-assembly lipoprotein LptE Sodalis glossinidius (strain morsitans)
A1JQ26 2.15e-60 189 58 2 176 3 lptE LPS-assembly lipoprotein LptE Yersinia enterocolitica serotype O:8 / biotype 1B (strain NCTC 13174 / 8081)
B1JGA6 2.5e-58 184 59 2 176 3 lptE LPS-assembly lipoprotein LptE Yersinia pseudotuberculosis serotype O:3 (strain YPIII)
Q66DE4 2.5e-58 184 59 2 176 3 lptE LPS-assembly lipoprotein LptE Yersinia pseudotuberculosis serotype I (strain IP32953)
A4TNZ8 2.5e-58 184 59 2 176 3 lptE LPS-assembly lipoprotein LptE Yersinia pestis (strain Pestoides F)
Q1CKQ5 2.5e-58 184 59 2 176 3 lptE LPS-assembly lipoprotein LptE Yersinia pestis bv. Antiqua (strain Nepal516)
A9R6Z1 2.5e-58 184 59 2 176 3 lptE LPS-assembly lipoprotein LptE Yersinia pestis bv. Antiqua (strain Angola)
Q7CJV2 2.5e-58 184 59 2 176 1 lptE LPS-assembly lipoprotein LptE Yersinia pestis
B2K885 2.5e-58 184 59 2 176 3 lptE LPS-assembly lipoprotein LptE Yersinia pseudotuberculosis serotype IB (strain PB1/+)
Q1C520 2.5e-58 184 59 2 176 3 lptE LPS-assembly lipoprotein LptE Yersinia pestis bv. Antiqua (strain Antiqua)
A7FKW1 2.5e-58 184 59 2 176 3 lptE LPS-assembly lipoprotein LptE Yersinia pseudotuberculosis serotype O:1b (strain IP 31758)
A8GB20 1.38e-57 182 58 2 171 3 lptE LPS-assembly lipoprotein LptE Serratia proteamaculans (strain 568)
B4TPX4 1.35e-52 169 47 5 188 3 lptE LPS-assembly lipoprotein LptE Salmonella schwarzengrund (strain CVM19633)
B5BCE7 1.35e-52 169 47 5 188 3 lptE LPS-assembly lipoprotein LptE Salmonella paratyphi A (strain AKU_12601)
C0PW77 1.35e-52 169 47 5 188 3 lptE LPS-assembly lipoprotein LptE Salmonella paratyphi C (strain RKS4594)
Q5PM87 1.35e-52 169 47 5 188 3 lptE LPS-assembly lipoprotein LptE Salmonella paratyphi A (strain ATCC 9150 / SARB42)
B4SYK6 1.35e-52 169 47 5 188 3 lptE LPS-assembly lipoprotein LptE Salmonella newport (strain SL254)
B4TB50 1.35e-52 169 47 5 188 3 lptE LPS-assembly lipoprotein LptE Salmonella heidelberg (strain SL476)
B5R7Z5 1.35e-52 169 47 5 188 3 lptE LPS-assembly lipoprotein LptE Salmonella gallinarum (strain 287/91 / NCTC 13346)
B5QVP8 1.35e-52 169 47 5 188 3 lptE LPS-assembly lipoprotein LptE Salmonella enteritidis PT4 (strain P125109)
B5FMP3 1.35e-52 169 47 5 188 3 lptE LPS-assembly lipoprotein LptE Salmonella dublin (strain CT_02021853)
Q57RS8 1.35e-52 169 47 5 188 3 lptE LPS-assembly lipoprotein LptE Salmonella choleraesuis (strain SC-B67)
Q8Z8H6 1.55e-52 169 47 5 188 3 lptE LPS-assembly lipoprotein LptE Salmonella typhi
B5EZ88 2.95e-52 168 48 4 179 3 lptE LPS-assembly lipoprotein LptE Salmonella agona (strain SL483)
Q8ZQZ7 1.98e-51 166 46 5 188 1 lptE LPS-assembly lipoprotein LptE Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q32IU0 1.61e-46 154 44 3 174 3 lptE LPS-assembly lipoprotein LptE Shigella dysenteriae serotype 1 (strain Sd197)
Q83LX4 3.6e-46 153 44 3 174 1 lptE LPS-assembly lipoprotein LptE Shigella flexneri
Q0T6Q1 3.6e-46 153 44 3 174 3 lptE LPS-assembly lipoprotein LptE Shigella flexneri serotype 5b (strain 8401)
Q324Q3 3.6e-46 153 44 3 174 3 lptE LPS-assembly lipoprotein LptE Shigella boydii serotype 4 (strain Sb227)
B7LLH2 3.8e-46 153 44 3 174 3 lptE LPS-assembly lipoprotein LptE Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CCUG 18766 / IAM 14443 / JCM 21226 / LMG 7866 / NBRC 102419 / NCTC 12128 / CDC 0568-73)
Q3Z4F1 4.14e-46 152 44 3 174 3 lptE LPS-assembly lipoprotein LptE Shigella sonnei (strain Ss046)
B2TU78 4.14e-46 152 44 3 174 3 lptE LPS-assembly lipoprotein LptE Shigella boydii serotype 18 (strain CDC 3083-94 / BS512)
Q1RES0 4.14e-46 152 44 3 174 3 lptE LPS-assembly lipoprotein LptE Escherichia coli (strain UTI89 / UPEC)
B1LL90 4.14e-46 152 44 3 174 3 lptE LPS-assembly lipoprotein LptE Escherichia coli (strain SMS-3-5 / SECEC)
B6I152 4.14e-46 152 44 3 174 3 lptE LPS-assembly lipoprotein LptE Escherichia coli (strain SE11)
B7N9P7 4.14e-46 152 44 3 174 3 lptE LPS-assembly lipoprotein LptE Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC)
P0ADC1 4.14e-46 152 44 3 174 1 lptE LPS-assembly lipoprotein LptE Escherichia coli (strain K12)
P0ADC2 4.14e-46 152 44 3 174 3 lptE LPS-assembly lipoprotein LptE Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Q0TK32 4.14e-46 152 44 3 174 3 lptE LPS-assembly lipoprotein LptE Escherichia coli O6:K15:H31 (strain 536 / UPEC)
A1A8R6 4.14e-46 152 44 3 174 3 lptE LPS-assembly lipoprotein LptE Escherichia coli O1:K1 / APEC
A7ZXR7 4.14e-46 152 44 3 174 3 lptE LPS-assembly lipoprotein LptE Escherichia coli O9:H4 (strain HS)
C4ZWC8 4.14e-46 152 44 3 174 3 lptE LPS-assembly lipoprotein LptE Escherichia coli (strain K12 / MC4100 / BW2952)
B7M5G8 4.14e-46 152 44 3 174 3 lptE LPS-assembly lipoprotein LptE Escherichia coli O8 (strain IAI1)
B7L9I5 4.14e-46 152 44 3 174 3 lptE LPS-assembly lipoprotein LptE Escherichia coli (strain 55989 / EAEC)
B7MFR4 4.14e-46 152 44 3 174 3 lptE LPS-assembly lipoprotein LptE Escherichia coli O45:K1 (strain S88 / ExPEC)
B7UKT1 4.14e-46 152 44 3 174 3 lptE LPS-assembly lipoprotein LptE Escherichia coli O127:H6 (strain E2348/69 / EPEC)
A7ZJ30 4.14e-46 152 44 3 174 3 lptE LPS-assembly lipoprotein LptE Escherichia coli O139:H28 (strain E24377A / ETEC)
B7MRS8 4.57e-46 152 44 3 174 3 lptE LPS-assembly lipoprotein LptE Escherichia coli O81 (strain ED1a)
B5YQJ3 2.19e-45 151 44 3 174 3 lptE LPS-assembly lipoprotein LptE Escherichia coli O157:H7 (strain EC4115 / EHEC)
Q8XBN9 2.19e-45 151 44 3 174 3 lptE LPS-assembly lipoprotein LptE Escherichia coli O157:H7
B1IYG7 2.69e-45 150 44 3 174 3 lptE LPS-assembly lipoprotein LptE Escherichia coli (strain ATCC 8739 / DSM 1576 / NBRC 3972 / NCIMB 8545 / WDCM 00012 / Crooks)
B7NM00 2.69e-45 150 44 3 174 3 lptE LPS-assembly lipoprotein LptE Escherichia coli O7:K1 (strain IAI39 / ExPEC)
Q57457 1.43e-28 107 35 2 152 3 lptE LPS-assembly lipoprotein LptE Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)

  • Number of RefSeq hits:

General

Source Morganella morganii S1
Locus tag FBDBKF_10040
Feature type CDS
Gene lptE
Product LPS assembly lipoprotein LptE
Location 102475 - 103029 (strand: 1)
Length 555 (nucleotides) / 184 (amino acids)

Contig

Accession contig_11
Length 143616 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1550
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF04390 Lipopolysaccharide-assembly

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG2980 Cell wall/membrane/envelope biogenesis (M) M Outer membrane lipoprotein LptE/RlpB (LPS assembly)

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K03643 LPS-assembly lipoprotein - -

Protein Sequence

MRHRIITLLLGLAVLVTAGCGFHLRGTTQIPPELQKLQISTGDPYGEQTRAIRQQLLLNNVQIIEGGDATIPVLKITSSSEGSEKTVSIFQDGKAAEKELVYYLNAQVIMPNGSVYPINVRVDRSFFDNPLEALAKDAEKDMIRQEMREQAAARLVRKLLIIQPSEQQKQAENAEAAEIVAPKA

Flanking regions ( +/- flanking 50bp)

GTGCCGGGTAAATTACTGAACCTGGTCGTGGGTTAATTTAAGGAGATATCGTGCGACATCGCATTATCACGCTGTTGCTCGGGCTTGCGGTGCTGGTCACCGCAGGCTGCGGCTTCCATCTGCGCGGCACCACGCAAATCCCGCCTGAACTGCAGAAACTGCAAATCAGCACCGGTGATCCGTATGGCGAACAGACCCGTGCTATCCGTCAGCAACTGCTGCTGAATAACGTTCAGATTATTGAAGGTGGTGATGCCACCATCCCGGTTCTGAAGATCACCAGTTCTTCCGAAGGTTCGGAAAAGACAGTATCGATTTTCCAGGACGGTAAAGCTGCTGAGAAAGAACTGGTTTATTACCTGAATGCCCAGGTCATTATGCCGAACGGGTCGGTTTATCCGATCAATGTCCGCGTTGACCGTTCATTCTTCGATAACCCGCTGGAAGCACTCGCAAAAGATGCGGAAAAAGATATGATCCGCCAGGAAATGCGTGAGCAGGCAGCCGCCCGTCTGGTTCGTAAACTGCTGATTATTCAGCCGTCCGAACAACAGAAACAGGCTGAAAATGCCGAAGCGGCTGAGATTGTCGCACCGAAGGCATGATAAAAGTTTCACCTGAGCAACTCATCACGCAGCTCCGTTCGGGGCTGCGT