Homologs in group_3278

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4 homologs were identified in 4 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
EHELCC_13920 EHELCC_13920 100.0 Morganella morganii S2 - Shiga toxin A subunit
NLDBIP_14365 NLDBIP_14365 100.0 Morganella morganii S4 - Shiga toxin A subunit
LHKJJB_08485 LHKJJB_08485 100.0 Morganella morganii S3 - Shiga toxin A subunit
HKOGLL_08035 HKOGLL_08035 100.0 Morganella morganii S5 - Shiga toxin A subunit

Distribution of the homologs in the orthogroup group_3278

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3278

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella morganii S1
Locus tag FBDBKF_08090
Feature type CDS
Gene -
Product Shiga toxin A subunit
Location 156896 - 157222 (strand: 1)
Length 327 (nucleotides) / 108 (amino acids)
In genomic island -

Contig

Accession contig_8
Length 164760 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3278
Orthogroup size 5
N. genomes 5

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Genomic region

Protein Sequence

MPVSYTPLSPEAYFFICCITYFFLHPPAGELLISQLAQETYDSLTDKSKSSPESYKKLFSVNPPYNLVLRITYVNKDNKKNIFIASGLADKDECSVHFNGWLTEQREF

Flanking regions ( +/- flanking 50bp)

TGCAATCATTTATAAAAGCATAATATTCACAGTTATAAGGTTTGATTACATTGCCCGTATCTTATACGCCTCTTTCTCCGGAGGCGTATTTTTTTATCTGTTGTATTACGTATTTCTTTCTGCATCCACCGGCCGGGGAATTGCTGATTTCTCAGCTTGCACAGGAAACCTATGATTCCCTGACAGATAAATCCAAAAGCTCACCGGAATCCTATAAAAAACTGTTTTCTGTTAATCCGCCGTATAACCTGGTTTTGCGGATCACGTATGTGAATAAAGATAATAAGAAGAATATCTTTATCGCCTCCGGACTGGCTGACAAAGATGAGTGCTCGGTGCACTTTAACGGCTGGCTGACAGAGCAGCGGGAATTCTGAGGCCGTCATAAACAAAAACGCCCGGACAGATGCCGGGCGTGACTGGTTAT