Homologs in group_3270

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4 homologs were identified in 4 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
EHELCC_17185 EHELCC_17185 100.0 Morganella morganii S2 yihN Inner membrane protein yihN
NLDBIP_13790 NLDBIP_13790 100.0 Morganella morganii S4 yihN Inner membrane protein yihN
LHKJJB_09060 LHKJJB_09060 100.0 Morganella morganii S3 yihN Inner membrane protein yihN
HKOGLL_08610 HKOGLL_08610 100.0 Morganella morganii S5 yihN Inner membrane protein yihN

Distribution of the homologs in the orthogroup group_3270

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3270

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P32135 1.29e-81 252 60 2 221 1 yihN Inner membrane protein YihN Escherichia coli (strain K12)
P77031 5.23e-10 61 25 4 222 1 yqcE Inner membrane protein YqcE Escherichia coli (strain K12)

  • Number of RefSeq hits:

General

Source Morganella morganii S1
Locus tag FBDBKF_07515
Feature type CDS
Gene yihN
Product Inner membrane protein yihN
Location 16905 - 17540 (strand: -1)
Length 636 (nucleotides) / 211 (amino acids)

Contig

Accession contig_8
Length 164760 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3270
Orthogroup size 5
N. genomes 5

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Genomic region

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG2271 Carbohydrate transport and metabolism (G) G Sugar phosphate permease

Protein Sequence

MLDKKRWAIFSLLVLCGGTVYKLPSLKDAFYVPMQEYFHLTNGQIGNAMSVNSIVTTIGFFLSIYFSDKLPRRLTISFSLIATGLLGNSSQQGRIFGFFETGRGVVDTVVAFSALAVFAWFGSGYLGFKMGILFYSGVAILVGGIIFLFLKDDKHAVTEPVNESGENKEKKPGVSAVLKDGTACRTGRYLRYSESVLPENGRRPYRRINRG

Flanking regions ( +/- flanking 50bp)

AACAACACTCAATACTGACTGAAAATTATTTTTCAGTCGGGAGGCACACTATGCTTGATAAAAAAAGATGGGCTATATTCAGCCTGTTAGTTCTGTGTGGCGGTACTGTCTATAAATTACCGTCACTGAAAGACGCCTTTTATGTTCCGATGCAGGAATATTTCCATCTGACAAATGGTCAGATTGGTAATGCCATGTCAGTAAACTCAATTGTGACGACCATTGGTTTCTTTTTATCTATTTATTTTTCTGACAAATTACCGCGCCGTCTGACAATTTCATTCTCATTAATTGCAACCGGTCTGCTGGGCAACAGCTCACAGCAGGGTCGGATATTCGGCTTCTTTGAAACCGGCCGCGGTGTGGTCGATACCGTGGTGGCCTTCTCCGCCCTTGCAGTCTTTGCCTGGTTCGGCAGCGGCTATCTCGGTTTTAAAATGGGGATCTTATTTTATTCCGGCGTGGCTATTCTGGTCGGTGGTATTATCTTCCTGTTCCTGAAAGATGATAAACACGCCGTCACCGAACCGGTGAATGAATCCGGTGAAAATAAAGAGAAAAAGCCCGGCGTCAGCGCGGTATTAAAAGACGGCACTGCCTGTCGCACTGGTCGGTATTTACGGTATTCTGAATCAGTATTGCCTGAAAATGGTCGGCGGCCCTATCGGCGGATTAATCGCGGATAAGATTTTAAAATCACCGACCAAATACCTGTTTTATACCTTTATTATCAGTG