Homologs in group_2677

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
EHELCC_06235 EHELCC_06235 100.0 Morganella morganii S2 cybC cytochrome b562
NLDBIP_06555 NLDBIP_06555 100.0 Morganella morganii S4 cybC cytochrome b562
LHKJJB_03435 LHKJJB_03435 100.0 Morganella morganii S3 cybC cytochrome b562
HKOGLL_06910 HKOGLL_06910 100.0 Morganella morganii S5 cybC cytochrome b562
F4V73_RS16085 F4V73_RS16085 86.8 Morganella psychrotolerans cybC cytochrome b562

Distribution of the homologs in the orthogroup group_2677

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2677

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0ABE8 3.95e-45 145 56 1 129 3 cybC Soluble cytochrome b562 Escherichia coli O157:H7
Q8CVG7 7.29e-45 145 55 1 129 3 cybC Soluble cytochrome b562 Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0ABE7 4.43e-44 143 55 1 129 1 cybC Soluble cytochrome b562 Escherichia coli
P63727 2.81e-39 131 57 1 129 1 cybC Soluble cytochrome b562 Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P63728 2.81e-39 131 57 1 129 3 cybC Soluble cytochrome b562 Salmonella typhi
Q8ZAU2 6.49e-30 107 44 1 129 3 cybC2 Probable soluble cytochrome b562 2 Yersinia pestis
Q9X6B1 2.87e-27 100 41 2 125 3 cybC1 Probable soluble cytochrome b562 1 Yersinia pestis
Q9CMY0 1.2e-06 47 28 3 128 3 PM0670 Uncharacterized protein PM0670 Pasteurella multocida (strain Pm70)

  • Number of RefSeq hits:

General

Source Morganella morganii S1
Locus tag FBDBKF_04945
Feature type CDS
Gene cybC
Product cytochrome b562
Location 194750 - 195139 (strand: -1)
Length 390 (nucleotides) / 129 (amino acids)

Contig

Accession contig_4
Length 199551 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2677
Orthogroup size 6
N. genomes 6

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Genomic region

Domains

PF07361 Cytochrome b562

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3783 Energy production and conversion (C) C Soluble cytochrome b562

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K15536 soluble cytochrome b562 - -

Protein Sequence

MSKNMLAMLVASVCAFGAMTASAAGLSDNMKTLNANLQIVEKTDDAAALKTALTDMRAAAQSAREELPAKLKGKAADSAEVKDYHHGYDVLTGQIDEALKLTEEGKIPEAKAMAEQFKATRGEYHKKYR

Flanking regions ( +/- flanking 50bp)

TGTGTGATGTCTTTGTCGTACTTTTATATTAAAAATAAAGGAAGCATCTGATGAGTAAAAATATGTTAGCTATGCTGGTGGCGTCTGTCTGTGCATTCGGCGCAATGACGGCATCTGCCGCCGGACTGTCAGATAATATGAAAACGCTGAACGCGAATCTGCAGATTGTTGAAAAAACAGATGACGCGGCAGCGCTGAAAACTGCACTGACCGACATGCGTGCTGCGGCACAGAGTGCCAGAGAAGAATTACCGGCCAAACTGAAAGGTAAAGCGGCGGACAGCGCAGAAGTGAAGGATTACCATCACGGTTATGATGTTCTGACCGGACAAATTGATGAAGCACTGAAGCTGACGGAAGAAGGTAAAATTCCGGAAGCGAAAGCCATGGCTGAACAATTTAAAGCCACCCGTGGTGAATACCACAAGAAATACCGTTAACAGCTGATATAAATACCATTTTCCGTATTAAAAACGCCCGGCATGATTGC