Homologs in group_3230

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4 homologs were identified in 4 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
EHELCC_06890 EHELCC_06890 100.0 Morganella morganii S2 - Formate dehydrogenase-H
NLDBIP_07215 NLDBIP_07215 100.0 Morganella morganii S4 - Formate dehydrogenase-H
LHKJJB_06750 LHKJJB_06750 100.0 Morganella morganii S3 - Formate dehydrogenase-H
HKOGLL_04180 HKOGLL_04180 100.0 Morganella morganii S5 - Formate dehydrogenase-H

Distribution of the homologs in the orthogroup group_3230

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3230

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P07658 2.31e-30 114 83 0 62 1 fdhF Formate dehydrogenase H Escherichia coli (strain K12)

  • Number of RefSeq hits:

General

Source Morganella morganii S1
Locus tag FBDBKF_03645
Feature type CDS
Gene -
Product Formate dehydrogenase-H
Location 132828 - 133025 (strand: -1)
Length 198 (nucleotides) / 65 (amino acids)
In genomic island -

Contig

Accession contig_3
Length 210665 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3230
Orthogroup size 5
N. genomes 5

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Genomic region

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3383 General function prediction only (R) R Predicted molibdopterin-dependent oxidoreductase YjgC

Protein Sequence

MTYQWWIGACNELVAENLSPITKTPEYKYCAVRVEPIADQKQAEHYVVQEYTGIKRRLREAAEGC

Flanking regions ( +/- flanking 50bp)

TTATCACCCGCGCGAATGTCAGTTAGCGTCCTAACAAAGGGGCGGTTTACATGACCTATCAGTGGTGGATTGGTGCGTGTAACGAGCTGGTGGCGGAAAACCTCAGCCCGATTACAAAAACACCGGAGTATAAATACTGTGCTGTCCGCGTCGAACCGATTGCGGATCAGAAACAGGCTGAGCATTATGTTGTTCAGGAATATACCGGTATTAAGCGCCGTCTGCGTGAAGCAGCGGAAGGGTGTTAATCCGTTCGTCTTAATATGATAAAAAACCGGCGCTCAGAAATGACCGCCGG