Homologs in group_3210

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4 homologs were identified in 4 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
EHELCC_03185 EHELCC_03185 100.0 Morganella morganii S2 fepB ABC-type Fe3+-hydroxamate transport system, periplasmic component
NLDBIP_00275 NLDBIP_00275 100.0 Morganella morganii S4 fepB ABC-type Fe3+-hydroxamate transport system, periplasmic component
LHKJJB_01760 LHKJJB_01760 100.0 Morganella morganii S3 fepB ABC-type Fe3+-hydroxamate transport system, periplasmic component
HKOGLL_01800 HKOGLL_01800 100.0 Morganella morganii S5 fepB ABC-type Fe3+-hydroxamate transport system, periplasmic component

Distribution of the homologs in the orthogroup group_3210

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3210

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
O34805 8.55e-15 77 22 11 284 3 yvrC Uncharacterized ABC transporter substrate-binding lipoprotein YvrC Bacillus subtilis (strain 168)
P44206 1.18e-14 77 25 10 283 1 molA Molybdate-binding protein MolA Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P37028 5.24e-08 56 27 7 177 1 btuF Vitamin B12-binding protein Escherichia coli (strain K12)
Q83MD7 7.6e-08 56 27 7 177 3 btuF Vitamin B12-binding protein Shigella flexneri
Q57550 1.25e-07 56 22 13 317 3 MJ0085 Uncharacterized lipoprotein MJ0085 Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
Q8X8Z0 1.62e-07 55 27 7 177 3 btuF Vitamin B12-binding protein Escherichia coli O157:H7
Q8CWD2 2.35e-07 54 27 6 161 3 btuF Vitamin B12-binding protein Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Q9HQ20 1.22e-06 53 26 7 218 1 btuF Cobalamin-binding protein Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC-1)
B0R5G2 1.22e-06 53 26 7 218 3 btuF Cobalamin-binding protein Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1)
Q6D1Z3 1.18e-05 49 29 5 161 3 btuF Vitamin B12-binding protein Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672)
C3LQF3 1.79e-05 49 22 10 260 3 btuF Vitamin B12-binding protein Vibrio cholerae serotype O1 (strain M66-2)
Q9KPI6 1.79e-05 49 22 10 260 3 btuF Vitamin B12-binding protein Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
A5F5P5 1.79e-05 49 22 10 260 1 btuF Vitamin B12-binding protein Vibrio cholerae serotype O1 (strain ATCC 39541 / Classical Ogawa 395 / O395)
Q8ZRP7 2.54e-05 48 25 7 177 3 btuF Vitamin B12-binding protein Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q66EE7 0.00045 45 27 7 156 3 btuF Vitamin B12-binding protein Yersinia pseudotuberculosis serotype I (strain IP32953)
A4TPX1 0.00045 45 27 7 156 3 btuF Vitamin B12-binding protein Yersinia pestis (strain Pestoides F)
Q1CLU2 0.00045 45 27 7 156 3 btuF Vitamin B12-binding protein Yersinia pestis bv. Antiqua (strain Nepal516)
A9R1E1 0.00045 45 27 7 156 3 btuF Vitamin B12-binding protein Yersinia pestis bv. Antiqua (strain Angola)
Q8ZBM3 0.00045 45 27 7 156 3 btuF Vitamin B12-binding protein Yersinia pestis
B2K552 0.00045 45 27 7 156 3 btuF Vitamin B12-binding protein Yersinia pseudotuberculosis serotype IB (strain PB1/+)
Q1C3X6 0.00045 45 27 7 156 3 btuF Vitamin B12-binding protein Yersinia pestis bv. Antiqua (strain Antiqua)
A7FM05 0.00045 45 27 7 156 3 btuF Vitamin B12-binding protein Yersinia pseudotuberculosis serotype O:1b (strain IP 31758)

  • Number of RefSeq hits:

General

Source Morganella morganii S1
Locus tag FBDBKF_02715
Feature type CDS
Gene fepB
Product ABC-type Fe3+-hydroxamate transport system, periplasmic component
Location 239418 - 240410 (strand: -1)
Length 993 (nucleotides) / 330 (amino acids)

Contig

Accession contig_2
Length 292399 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3210
Orthogroup size 5
N. genomes 5

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Genomic region

Domains

PF01497 Periplasmic binding protein

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0614 Inorganic ion transport and metabolism (P) P ABC-type Fe3+-hydroxamate transport system, periplasmic component

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K02016 iron complex transport system substrate-binding protein - -

Protein Sequence

MRHYLSALCLLFVSTCVFSAPAEAPPEPALRIATPWPAQNAIIMMLGYGSNITGTSRVAKQIPLFRQMLPQIDDVPVIGTTGGNELNIEQILSLRTDILFIHDGIRVPQQEVLAQAGVRVLAFKANSMDALRERVKLTGEALGPDAAEKAAQYERYFRDNIRRVQERLKNVPASARLRVYHSMGNPLYTSGRPSLNQDWMDLAGAVNVAENWFPAHSSANGEVSSEQIIAADPQVIIAMNRRDAEFIQQSPQWQSIDAVRNGRIYTNPRGMFWWCRETSEEALQFLWLATVLYPDAFADIDMRNETATFYQTFYGITLTPQQITDILQPE

Flanking regions ( +/- flanking 50bp)

GTGAATTCCGGGCCACCGTATCATTTGATTTTTAACACGGAGGCAGCGTGATGCGGCACTATTTATCAGCGTTATGCCTGTTATTTGTCAGTACCTGTGTCTTCAGTGCCCCGGCAGAAGCGCCGCCGGAACCGGCACTGCGGATAGCAACACCGTGGCCGGCGCAGAATGCGATTATTATGATGCTGGGTTACGGCAGTAATATCACCGGAACCTCGCGGGTTGCCAAACAGATCCCGCTGTTCCGTCAGATGCTGCCGCAGATTGATGATGTGCCGGTCATCGGCACCACCGGCGGAAATGAGCTGAATATTGAACAAATTCTGAGTCTGAGGACAGATATTTTATTTATTCATGACGGGATCCGCGTTCCGCAGCAGGAGGTGCTGGCACAGGCCGGTGTCCGTGTGCTGGCTTTTAAAGCCAACAGTATGGATGCACTGCGGGAGCGGGTAAAACTGACCGGTGAGGCGCTTGGCCCGGATGCGGCAGAGAAAGCGGCGCAATATGAGCGCTATTTCCGTGACAATATCCGCCGCGTGCAGGAACGGCTGAAAAATGTTCCGGCGTCTGCCCGTCTGCGGGTGTATCACAGCATGGGAAACCCGTTATATACCTCAGGGCGGCCATCGCTTAATCAGGACTGGATGGATCTGGCCGGCGCAGTCAATGTGGCAGAAAACTGGTTTCCGGCACACAGCAGTGCTAACGGAGAGGTATCATCAGAGCAGATTATCGCGGCTGATCCGCAGGTGATTATTGCGATGAACCGGCGGGATGCAGAATTTATTCAGCAATCGCCGCAATGGCAGTCAATTGATGCCGTGCGTAACGGGCGGATCTATACCAATCCGCGTGGTATGTTCTGGTGGTGCCGCGAAACGTCAGAGGAGGCATTGCAGTTTCTCTGGCTGGCTACAGTGCTGTACCCGGACGCCTTTGCGGATATTGATATGAGAAATGAAACAGCCACGTTTTATCAGACGTTTTATGGGATTACGCTGACACCGCAGCAGATCACGGATATTCTGCAACCGGAGTGATCCGGATATGCCGTCGCCGGTTTCCGGTGACGGCATTGTACCTCTTTTAT