Homologs in group_3190

Help

4 homologs were identified in 4 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
EHELCC_02035 EHELCC_02035 100.0 Morganella morganii S2 pncA Nicotinamidase-related amidase
NLDBIP_01425 NLDBIP_01425 100.0 Morganella morganii S4 pncA Nicotinamidase-related amidase
LHKJJB_00610 LHKJJB_00610 100.0 Morganella morganii S3 pncA Nicotinamidase-related amidase
HKOGLL_00650 HKOGLL_00650 100.0 Morganella morganii S5 pncA Nicotinamidase-related amidase

Distribution of the homologs in the orthogroup group_3190

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_3190

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P21367 3.87e-40 139 42 1 169 1 ycaC Probable hydrolase YcaC Escherichia coli (strain K12)
Q54NZ8 8.41e-08 53 24 5 174 3 DDB_G0284901 Isochorismatase family protein 1B Dictyostelium discoideum
G4YEI5 1.74e-05 47 24 7 194 1 Isc1 Secreted isochorismatase effector Isc1 Phytophthora sojae (strain P6497)
A0JME6 5.7e-05 45 23 6 178 2 isoc2 Isochorismatase domain-containing protein 2 Danio rerio
Q5PQ71 0.000137 44 26 5 156 2 isoc2 Isochorismatase domain-containing protein 2 Xenopus laevis
Q54NZ6 0.000149 44 25 8 192 3 DDB_G0285041 Isochorismatase family protein 1A Dictyostelium discoideum
Q54RC7 0.000561 43 23 6 180 3 DDB_G0283199 Isochorismatase family protein 2B Dictyostelium discoideum
Q5PQA5 0.000758 43 28 2 134 2 isoc1 Isochorismatase domain-containing protein 1 Xenopus laevis
Q6DF67 0.001 42 28 4 129 2 isoc2 Isochorismatase domain-containing protein 2 Xenopus tropicalis

  • Number of RefSeq hits:

General

Source Morganella morganii S1
Locus tag FBDBKF_01565
Feature type CDS
Gene pncA
Product Nicotinamidase-related amidase
Location 3129 - 3773 (strand: 1)
Length 645 (nucleotides) / 214 (amino acids)

Contig

Accession contig_2
Length 292399 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3190
Orthogroup size 5
N. genomes 5

Actions

Genomic region

Domains

PF00857 Isochorismatase family

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1335 Coenzyme transport and metabolism (H)
General function prediction only (R)		 HR Nicotinamidase-related amidase

Protein Sequence

MSKLELLNPQNSAVIFIDHQPQMAFGVANIDRQQLKNNTVGLAKAAKIFNVPTIYTSVETESFSGYIWPELLAVHPESKPIERTSMNSWEDPKFVEAVKATGRKKLVMAALWTEVCLNFPTLMAIEAGYEVYIVTDASGGTSVDAHERSIDRMVQAGAIPVTWQQVLLEYQRDWSRKETYDAVMGLVQEHSGAYGMGVDYAYTMVHKAPQRVIK

Flanking regions ( +/- flanking 50bp)

AAGATTAATATTTATTTTTATCAATTTAACCAATTGAACAGGAACGCATTATGTCTAAATTAGAACTGTTAAACCCACAAAATTCTGCCGTTATTTTTATTGATCATCAGCCGCAAATGGCCTTTGGTGTGGCAAATATCGACCGCCAGCAGCTGAAAAATAATACCGTTGGCCTGGCAAAAGCAGCAAAAATTTTCAATGTGCCGACAATTTATACCTCCGTTGAAACAGAAAGCTTCAGCGGATATATCTGGCCTGAATTACTGGCCGTCCATCCTGAATCAAAACCTATCGAACGTACCTCCATGAATTCCTGGGAAGACCCGAAATTTGTCGAAGCCGTTAAAGCCACCGGACGTAAAAAATTAGTGATGGCGGCATTATGGACAGAAGTCTGCCTGAATTTCCCGACCTTAATGGCGATTGAAGCCGGTTATGAAGTTTATATTGTGACAGATGCATCCGGCGGTACCTCAGTTGATGCGCATGAACGTTCTATTGATCGTATGGTGCAGGCCGGGGCTATTCCTGTGACCTGGCAGCAGGTATTGCTGGAGTACCAGCGCGACTGGTCCCGTAAAGAAACCTATGACGCAGTAATGGGGCTGGTTCAGGAGCACAGCGGTGCTTACGGCATGGGTGTCGATTACGCCTATACTATGGTTCATAAAGCACCTCAGCGCGTTATTAAGTAACAGCGTAACAACCGGAGAGGTCGCTCTCCGGTTATTTTTTCCTATACCGC