Homologs in group_3146

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4 homologs were identified in 4 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
EHELCC_01320 EHELCC_01320 100.0 Morganella morganii S2 - DNA-binding protein
NLDBIP_02140 NLDBIP_02140 100.0 Morganella morganii S4 - DNA-binding protein
LHKJJB_03655 LHKJJB_03655 100.0 Morganella morganii S3 - DNA-binding protein
HKOGLL_03390 HKOGLL_03390 100.0 Morganella morganii S5 - DNA-binding protein

Distribution of the homologs in the orthogroup group_3146

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3146

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella morganii S1
Locus tag FBDBKF_00225
Feature type CDS
Gene -
Product DNA-binding protein
Location 33888 - 34082 (strand: -1)
Length 195 (nucleotides) / 64 (amino acids)
In genomic island -

Contig

Accession contig_1
Length 309072 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3146
Orthogroup size 5
N. genomes 5

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Genomic region

Protein Sequence

MEPTDFEKWCAEETGMPLNRIMRWKFGDGYTEGAINAMYRAWNAGVRSRLPYQTPPKGDEDEMD

Flanking regions ( +/- flanking 50bp)

TCGGCTTCCGGACGCGGACGGCATAACCCAAGACAGAAGGACTTTTGATTATGGAACCAACGGATTTTGAAAAGTGGTGTGCGGAAGAAACGGGAATGCCGCTGAACCGCATCATGCGATGGAAGTTCGGTGATGGTTATACCGAAGGTGCCATCAATGCCATGTACCGCGCATGGAATGCCGGAGTACGCAGCAGGCTGCCGTACCAGACACCGCCAAAAGGAGATGAAGATGAAATGGATTAAGTGCTCTGAAAAAATGCCGGAAGACCGCAGTGGTGTCCTGCTATGGGATG