Homologs in group_3776

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1 homologs were identified in 1 genome with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_20190 FBDBKF_20190 33.9 Morganella morganii S1 repA Regulatory protein RepA

Distribution of the homologs in the orthogroup group_3776

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3776

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS19475
Feature type CDS
Gene -
Product helicase RepA family protein
Location 131652 - 132719 (strand: -1)
Length 1068 (nucleotides) / 355 (amino acids)

Contig

Accession term accessions NZ_VXKB01000002 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 573139 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3776
Orthogroup size 2
N. genomes 2

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Genomic region

Domains

PF13481 AAA domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3598 Replication, recombination and repair (L) L RecA-family ATPase

Protein Sequence

MNYTAPQFNSNLPLRKGSDGFDTRQDYLIKGYLPGSCVASAYGASGSYKSFLAVSWGCHIATGKPWAGKPVTQGAVIYVVGEGGIGVPRRIRAWEQTLNGGSPIDSLYRVDCPIFPASPDSVHQVIQAANDVKDATGMPVRLIILDTLARCFGGSDENAAKDMGAFIQGCDFIKAATQATVLVIHHSGKDQDKGARGSSAFRAALDVEFHVRREGEDPAIILSCTKMKDAEEPPRRAYDLHSVDLYVDEDGDQITSLVLNDEGREVRDDDPASDPDLAGVPRLTDNHVALWQAIRSRTAKGESCTRAVLRDDMKAMGFDVSKKFSRWLDKLEKDNLITLRGEEIIPLSYQTKVGD

Flanking regions ( +/- flanking 50bp)

CGGCATTCCGCAAACAGTGCTATCAGCCGCAGCGCGCACCGCTTACCTGCATTAATTACACTGCGCCGCAATTCAACAGCAATCTTCCGCTGCGCAAAGGTTCTGACGGCTTTGATACACGTCAGGATTATCTGATCAAAGGCTATCTGCCCGGTTCGTGTGTTGCCAGTGCCTATGGTGCCAGCGGGTCGTATAAATCGTTCCTGGCGGTTTCGTGGGGATGCCATATCGCAACCGGCAAGCCGTGGGCGGGTAAACCGGTTACACAGGGTGCGGTGATTTATGTTGTCGGTGAGGGGGGGATCGGCGTACCCCGCCGTATCCGTGCGTGGGAACAGACACTGAACGGCGGCAGTCCGATAGATTCACTCTACCGCGTTGATTGCCCGATTTTCCCGGCAAGCCCGGACAGTGTGCATCAGGTGATACAAGCCGCGAATGATGTAAAAGACGCAACGGGTATGCCGGTGCGCCTGATCATACTCGACACCCTCGCCCGCTGTTTCGGTGGTTCGGATGAGAATGCAGCCAAAGATATGGGCGCATTCATTCAGGGCTGTGATTTTATCAAAGCCGCCACACAGGCCACTGTTCTGGTTATCCATCACTCCGGCAAAGATCAGGATAAGGGTGCGAGAGGCTCCAGTGCGTTTCGTGCAGCTCTTGATGTCGAGTTTCATGTGCGCCGCGAAGGTGAAGACCCGGCAATCATCCTCAGTTGCACCAAAATGAAAGATGCAGAAGAGCCGCCGCGCCGTGCGTATGATCTGCATTCTGTTGATTTATATGTGGATGAGGACGGCGACCAGATCACCTCACTGGTACTAAATGACGAAGGGCGTGAGGTCCGGGATGACGATCCGGCCTCTGATCCGGATTTAGCCGGTGTTCCGCGCCTGACGGACAACCATGTCGCGCTGTGGCAGGCTATCCGCTCACGGACAGCCAAAGGCGAAAGCTGCACCCGTGCGGTACTGCGTGACGATATGAAAGCAATGGGATTTGATGTCTCCAAAAAGTTTTCCCGCTGGCTGGATAAGCTGGAAAAAGACAATCTGATCACATTGCGTGGCGAGGAAATTATCCCGCTGTCGTATCAGACCAAAGTGGGGGACTAAACGGGGGAATAGTGGGGGAAGCTGTCCGGAGTACCACAAAAACCGGTGTT