Homologs in group_375

Help

7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_18690 FBDBKF_18690 37.9 Morganella morganii S1 - MbeCy
EHELCC_15265 EHELCC_15265 37.9 Morganella morganii S2 - MbeCy
NLDBIP_15795 NLDBIP_15795 37.9 Morganella morganii S4 - MbeCy
LHKJJB_16045 LHKJJB_16045 37.9 Morganella morganii S3 - MbeCy
HKOGLL_15165 HKOGLL_15165 37.9 Morganella morganii S5 - MbeCy
F4V73_RS19190 F4V73_RS19190 96.1 Morganella psychrotolerans - MobC family plasmid mobilization relaxosome protein
PMI_RS19440 PMI_RS19440 43.9 Proteus mirabilis HI4320 - hypothetical protein

Distribution of the homologs in the orthogroup group_375

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_375

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P13657 2.55e-09 53 39 2 96 1 mbeC Mobilization protein MbeC Escherichia coli

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS19230
Feature type CDS
Gene -
Product MobC family plasmid mobilization relaxosome protein
Location 3093 - 3404 (strand: 1)
Length 312 (nucleotides) / 103 (amino acids)
In genomic island -

Contig

Accession NZ_VXKB01000014
Length 5045 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_375
Orthogroup size 8
N. genomes 7

Actions

Genomic region

Domains

PF05713 Bacterial mobilisation protein (MobC)

Protein Sequence

MTTKRTETVIIRLTSDEKQSLLLRKTKPRLAEWLRELALGQKPKRQPKSVAPALLFELNRIGVNLNQIARHCHQAPGSMETVNIALALRHIEAQLREVLDRAD

Flanking regions ( +/- flanking 50bp)

CTCGTGCCCTTGCAATGGGCTTCGCCCCTTGACCCCAAAAGGACAAAAGCATGACGACCAAACGTACTGAAACCGTGATTATTCGCCTGACATCTGACGAGAAACAATCGTTACTTTTGCGAAAAACCAAACCCCGTTTGGCTGAGTGGTTACGTGAACTGGCGTTAGGTCAGAAACCCAAACGTCAGCCGAAAAGCGTTGCTCCTGCGTTGTTGTTTGAGCTTAACCGGATAGGAGTGAACCTCAACCAGATAGCCCGTCATTGCCATCAAGCACCGGGTTCGATGGAAACGGTCAATATTGCCTTAGCGTTACGACATATTGAGGCACAGCTTCGGGAGGTGCTCGACCGTGCTGATTAAATTCTTTGGTAACAAAGGCGGTGGCAGTCCGAAAGCCAGCATGGATTATT