Homologs in group_4279

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0 homologs were identified in 0 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product

Distribution of the homologs in the orthogroup group_4279

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_4279

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P43870 8.71e-37 136 32 10 307 1 hindIIIR Type II restriction enzyme HindIII Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS19210
Feature type CDS
Gene -
Product HindIII family type II restriction endonuclease
Location 240 - 1151 (strand: 1)
Length 912 (nucleotides) / 303 (amino acids)

Contig

Accession term accessions NZ_VXKB01000014 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 5045 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_4279
Orthogroup size 1
N. genomes 1

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Genomic region

Domains

PF09518 HindIII restriction endonuclease

Protein Sequence

MNYITDDAKLRRYYWIDEIVKLSGNFVNDSSRVEQEIIGEVLRTGSSALMDHLRLCTAIPESYAHDSSEEKLYSKYTDALISECFKFIGLNSIVLTERADAADVEVSSEKYSFVADAKVFRLSRTAKNQKDFKVQAMDGWRQSNDFAMVVCPIYQLPTKNSQIYQQAISRNVCIFTYTHLSVLVRYSEIKGKTKAIDLLHKIFKSVSLINPSKDSVLYWTMINRTMLEFDEDIHNLWLDEKKATDEGILASKEIALEFLSSERNRILRMTKEEAVSELIKINKITSREDQIRKVNNNNILSLS

Flanking regions ( +/- flanking 50bp)

ATATGAGATAATTGGAGTAACTAATAAATATGATGAATAAATGACATAAAATGAACTATATAACAGATGATGCTAAATTAAGACGTTACTATTGGATTGATGAAATAGTTAAATTGAGTGGTAATTTTGTTAACGACTCCAGTCGAGTAGAACAAGAGATTATTGGTGAGGTTCTTAGAACCGGTAGTTCAGCATTAATGGATCATCTAAGGTTATGCACTGCAATTCCTGAATCGTATGCTCATGATTCAAGTGAAGAAAAATTATACTCTAAATATACGGATGCATTAATATCAGAGTGTTTTAAGTTTATTGGATTAAATAGCATTGTATTGACAGAAAGAGCTGATGCTGCAGATGTTGAAGTTTCTAGTGAAAAATATTCTTTTGTAGCTGATGCAAAAGTATTTAGATTAAGTAGAACAGCAAAAAATCAAAAAGATTTTAAAGTTCAAGCCATGGATGGTTGGCGACAAAGTAATGATTTTGCAATGGTTGTTTGCCCAATATATCAATTACCAACAAAAAACAGTCAGATATATCAGCAGGCAATCTCAAGGAATGTATGTATATTTACCTATACTCACTTAAGTGTATTGGTTCGGTATTCAGAAATAAAAGGAAAAACAAAAGCCATTGATTTACTTCATAAAATATTCAAATCAGTATCATTGATTAATCCATCAAAAGATAGCGTGTTATATTGGACAATGATAAATAGAACGATGTTAGAGTTTGATGAAGATATACATAATTTATGGTTAGATGAAAAAAAAGCCACAGATGAGGGGATTTTGGCTTCAAAGGAAATAGCTCTTGAATTTCTTTCTAGTGAAAGGAATAGGATATTAAGAATGACAAAAGAAGAAGCCGTGTCTGAGTTAATTAAAATTAATAAAATAACTTCGAGAGAAGATCAGATCAGGAAAGTGAACAATAACAATATTCTTTCACTTTCCTAAATCAGTTAAAATAAATTATGGACTGATGCTATTCTTTTTAGGCTGACTTC