Homologs in group_4276

Help

0 homologs were identified in 0 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product

Distribution of the homologs in the orthogroup group_4276

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_4276

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS19165
Feature type CDS
Gene -
Product helix-turn-helix domain-containing protein
Location 9809 - 10234 (strand: 1)
Length 426 (nucleotides) / 141 (amino acids)

Contig

Accession term accessions NZ_VXKB01000012 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 10864 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_4276
Orthogroup size 1
N. genomes 1

Actions

Genomic region

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG2452 Mobilome: prophages, transposons (X) X Predicted site-specific integrase-resolvase

Protein Sequence

MALVSVTEAARLTGKNRATIHRYIKQGKLSQISDATNTKKVDTSELIRVFGSLNATHATLSQSDAMQHDATPKTDQSVALLQQKIALLEQLLESKNNELQRQDEHIDSLKQAMLLIESKLPATPDPVAPAPTKKPWQFWKK

Flanking regions ( +/- flanking 50bp)

AACTACGCTAGAGAAAATTCTGGCGAAATACGGGCGGATATGAGGTATCTATGGCACTGGTATCAGTTACAGAGGCAGCCAGACTAACTGGAAAAAACAGAGCAACAATACATCGCTATATTAAGCAAGGAAAACTGTCGCAAATTTCTGATGCAACAAATACAAAAAAAGTAGATACATCAGAGCTTATTCGTGTATTTGGTTCACTAAATGCGACACATGCAACACTGTCGCAAAGCGATGCAATGCAGCACGATGCAACACCTAAAACAGATCAATCCGTTGCACTGTTACAACAAAAAATTGCACTTTTAGAACAACTGCTTGAAAGCAAAAATAACGAATTACAACGTCAGGACGAGCATATAGACAGCCTGAAACAAGCAATGCTATTAATCGAATCCAAGTTACCAGCAACACCCGACCCCGTTGCACCTGCACCAACCAAAAAACCGTGGCAATTCTGGAAAAAATAGCCGGTTGGTGTCATTTTTATCGCGAAACCGAAACCACCATTTTGATAACA