Homologs in group_2361

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_19055 FBDBKF_19055 82.8 Morganella morganii S1 - DUF1488 domain-containing protein
EHELCC_18800 EHELCC_18800 82.8 Morganella morganii S2 - DUF1488 domain-containing protein
NLDBIP_18815 NLDBIP_18815 82.8 Morganella morganii S4 - DUF1488 domain-containing protein
LHKJJB_18670 LHKJJB_18670 82.8 Morganella morganii S3 - DUF1488 domain-containing protein
HKOGLL_18405 HKOGLL_18405 82.8 Morganella morganii S5 - DUF1488 domain-containing protein
PMI_RS16335 PMI_RS16335 43.5 Proteus mirabilis HI4320 - DUF1488 domain-containing protein

Distribution of the homologs in the orthogroup group_2361

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2361

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P45795 7.27e-21 81 47 0 73 4 yrdB Uncharacterized protein YrdB Escherichia coli (strain K12)
Q83JD2 1.4e-20 80 47 0 73 4 yrdB Uncharacterized protein YrdB Shigella flexneri

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS19110
Feature type CDS
Gene -
Product DUF1488 domain-containing protein
Location 29497 - 29760 (strand: 1)
Length 264 (nucleotides) / 87 (amino acids)

Contig

Accession term accessions NZ_VXKB01000011 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 30728 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2361
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF07369 Protein of unknown function (DUF1488)

Protein Sequence

MNQSIQFPDRESRDDDQQCIIFPVMINGFLSDCCVSGQYLQSRYGADIDEDMLALFRRNRWDLEEEFAEFIEKDGAEESPYRLPCDR

Flanking regions ( +/- flanking 50bp)

TTACCGGATATTGCGCCGGTACTGGCTCAGCTTAAACAGAGGATGACATAATGAATCAGTCAATTCAGTTTCCTGACCGTGAATCCCGGGATGATGACCAGCAATGTATTATCTTTCCTGTCATGATTAATGGTTTTCTGTCTGATTGCTGTGTATCCGGACAATATCTGCAATCCCGCTACGGGGCAGATATTGACGAAGATATGCTGGCTCTCTTCCGCCGGAACCGTTGGGATCTGGAGGAAGAGTTCGCGGAGTTTATTGAAAAGGACGGAGCAGAAGAATCACCTTACCGGTTACCCTGCGACAGATAATCGTTTTTCCACATGACATAGTTATCTGCTGAATGCTTCAGTCCTTCATA