Homologs in group_1334

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_08250 FBDBKF_08250 85.1 Morganella morganii S1 rffC dTDP-4-amino-4,6-dideoxy-D-galactose acyltransferase
EHELCC_13275 EHELCC_13275 85.1 Morganella morganii S2 rffC dTDP-4-amino-4,6-dideoxy-D-galactose acyltransferase
NLDBIP_13615 NLDBIP_13615 85.1 Morganella morganii S4 rffC dTDP-4-amino-4,6-dideoxy-D-galactose acyltransferase
LHKJJB_12940 LHKJJB_12940 85.1 Morganella morganii S3 rffC dTDP-4-amino-4,6-dideoxy-D-galactose acyltransferase
HKOGLL_12090 HKOGLL_12090 85.1 Morganella morganii S5 rffC dTDP-4-amino-4,6-dideoxy-D-galactose acyltransferase
PMI_RS16510 PMI_RS16510 53.4 Proteus mirabilis HI4320 rffC dTDP-4-amino-4,6-dideoxy-D-galactose acyltransferase

Distribution of the homologs in the orthogroup group_1334

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1334

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q8FBQ3 1.84e-66 207 46 2 235 1 wecD dTDP-fucosamine acetyltransferase Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P27832 3.35e-66 207 46 2 235 3 wecD dTDP-fucosamine acetyltransferase Escherichia coli (strain K12)
P39624 3.34e-05 47 26 4 140 4 spsD Spore coat polysaccharide biosynthesis protein SpsD Bacillus subtilis (strain 168)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS18800
Feature type CDS
Gene rffC
Product dTDP-4-amino-4,6-dideoxy-D-galactose acyltransferase
Location 29497 - 30222 (strand: 1)
Length 726 (nucleotides) / 241 (amino acids)

Contig

Accession term accessions NZ_VXKB01000010 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 36620 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1334
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF00583 Acetyltransferase (GNAT) family

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0454 Transcription (K)
General function prediction only (R)		 KR N-acetyltransferase, GNAT superfamily (includes histone acetyltransferase HPA2)

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K16704 dTDP-4-amino-4,6-dideoxy-D-galactose acyltransferase [EC:2.3.1.210] O-Antigen nucleotide sugar biosynthesis
Metabolic pathways
Biosynthesis of nucleotide sugars		 -

Protein Sequence

MSVRASIDPLAWESDFFALKTAKLALSPDAALLTVADFAPYDLVQAKITTGDLNALDGLSALGFSLAESEVDFALKLQAGTENAMSHRPLCYAVSDDIAVIKTAAAQVFAQSRFRAPWYQPDDSARFYTTWAEKAVLGTFDKDCLLVRNEKNETAGFVTLRKPDEQSARIGLLAVLPGNQGQGIGLKLMSAAQQWCAEHHCRVLRVATQLSNLAAMRLYTKSGGTIDSTAYWLYRGCNDSI

Flanking regions ( +/- flanking 50bp)

CCGTCAGCTGGCGAAAACCGGTTATGGTCAGTATCTGAAGAATTTACTTCATGTCCGTCCGCGCCAGTATTGATCCACTCGCGTGGGAAAGTGACTTTTTTGCCCTGAAAACGGCAAAACTGGCACTTTCCCCGGATGCTGCCCTCCTGACGGTCGCCGATTTCGCGCCTTATGACCTGGTGCAGGCAAAAATCACCACCGGCGACCTGAATGCGCTGGATGGCTTATCCGCACTGGGCTTTTCTTTAGCAGAAAGTGAAGTGGATTTTGCGCTGAAATTGCAGGCTGGCACAGAAAATGCAATGTCTCACAGACCGCTGTGTTATGCCGTCAGTGATGATATTGCGGTCATAAAAACGGCGGCGGCACAGGTATTTGCGCAGAGCCGCTTTCGTGCCCCCTGGTATCAGCCGGACGACAGCGCCCGGTTCTATACAACCTGGGCGGAAAAAGCGGTACTGGGTACGTTTGATAAAGATTGCCTGCTGGTTCGTAATGAAAAGAATGAAACAGCCGGGTTTGTCACACTACGCAAACCGGACGAACAGAGCGCCCGCATAGGTCTGCTGGCGGTACTGCCGGGCAATCAGGGTCAGGGAATTGGCCTGAAATTAATGTCGGCGGCGCAACAGTGGTGTGCAGAACATCACTGCCGTGTATTACGGGTTGCAACACAGCTCAGTAATCTTGCGGCAATGCGCCTTTATACAAAAAGTGGCGGTACGATTGACAGTACAGCCTATTGGTTATACCGAGGATGCAATGATTCCATTTAATAAACCACCTGTAGTCGGCACTGAAGTTGGGTATATGCAGCAGGCCATGA