Homologs in group_1332

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_08240 FBDBKF_08240 95.5 Morganella morganii S1 rffG dTDP-glucose 4,6-dehydratase
EHELCC_13285 EHELCC_13285 95.5 Morganella morganii S2 rffG dTDP-glucose 4,6-dehydratase
NLDBIP_13625 NLDBIP_13625 95.5 Morganella morganii S4 rffG dTDP-glucose 4,6-dehydratase
LHKJJB_12930 LHKJJB_12930 95.5 Morganella morganii S3 rffG dTDP-glucose 4,6-dehydratase
HKOGLL_12100 HKOGLL_12100 95.5 Morganella morganii S5 rffG dTDP-glucose 4,6-dehydratase
PMI_RS16500 PMI_RS16500 84.9 Proteus mirabilis HI4320 rffG dTDP-glucose 4,6-dehydratase

Distribution of the homologs in the orthogroup group_1332

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1332

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P27830 0.0 610 80 0 354 1 rffG dTDP-glucose 4,6-dehydratase 2 Escherichia coli (strain K12)
P55294 0.0 590 78 0 352 3 rfbB1 dTDP-glucose 4,6-dehydratase Neisseria meningitidis serogroup B (strain ATCC BAA-335 / MC58)
Q9S642 0.0 565 78 0 336 3 rfbB1 dTDP-glucose 4,6-dehydratase Neisseria meningitidis serogroup A / serotype 4A (strain DSM 15465 / Z2491)
P37777 0.0 556 76 2 352 3 rfbB dTDP-glucose 4,6-dehydratase Shigella flexneri
P37761 0.0 555 77 0 335 3 rfbB dTDP-glucose 4,6-dehydratase Neisseria gonorrhoeae
P37759 0.0 550 75 2 352 3 rfbB dTDP-glucose 4,6-dehydratase 1 Escherichia coli (strain K12)
P55293 0.0 539 74 2 352 3 rfbB dTDP-glucose 4,6-dehydratase Escherichia coli
P26391 0.0 537 72 2 352 1 rfbB dTDP-glucose 4,6-dehydratase Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q6E7F4 0.0 536 73 1 359 1 rmlB dTDP-glucose 4,6-dehydratase Escherichia coli
P44914 3.84e-166 470 63 0 336 3 rffG dTDP-glucose 4,6-dehydratase Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P55462 4.71e-161 457 62 3 351 3 NGR_a03580 Probable dTDP-glucose 4,6-dehydratase Sinorhizobium fredii (strain NBRC 101917 / NGR234)
B0RVL0 7.24e-148 424 59 3 348 3 rfbB dTDP-glucose 4,6-dehydratase Xanthomonas campestris pv. campestris (strain B100)
P0C7J0 4.74e-147 422 59 3 348 3 rfbB dTDP-glucose 4,6-dehydratase Xanthomonas campestris pv. campestris (strain ATCC 33913 / DSM 3586 / NCPPB 528 / LMG 568 / P 25)
A0QSK6 7.58e-104 311 47 7 344 1 rmlB dTDP-glucose 4,6-dehydratase Mycolicibacterium smegmatis (strain ATCC 700084 / mc(2)155)
P39630 2.97e-103 309 47 4 336 1 rfbB dTDP-glucose 4,6-dehydratase Bacillus subtilis (strain 168)
P95780 2.1e-100 303 46 8 349 1 rmlB dTDP-glucose 4,6-dehydratase Streptococcus mutans serotype c (strain ATCC 700610 / UA159)
P9WN65 2.3e-99 300 47 8 348 1 rmlB dTDP-glucose 4,6-dehydratase Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WN64 2.3e-99 300 47 8 348 3 rmlB dTDP-glucose 4,6-dehydratase Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
Q9L9E8 1.19e-93 285 47 6 341 3 novT dTDP-glucose 4,6-dehydratase Streptomyces niveus
Q9ZAE8 2.25e-92 282 45 9 344 3 acbB dTDP-glucose 4,6-dehydratase Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110)
D4GU72 1.66e-89 274 46 6 332 3 agl12 Low-salt glycan biosynthesis protein Agl12 Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2)
Q9RR28 2.23e-86 267 43 8 345 3 oleE dTDP-glucose 4,6-dehydratase Streptomyces antibioticus
P29782 1.19e-81 254 45 8 338 1 strE dTDP-glucose 4,6-dehydratase Streptomyces griseus
P35675 6.4e-78 239 69 0 163 3 None Uncharacterized protein in galE 3'region (Fragment) Erwinia amylovora
Q9LPG6 3.31e-75 248 38 6 342 1 RHM2 Trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM2 Arabidopsis thaliana
Q8VDR7 1.88e-74 237 37 6 344 2 Tgds dTDP-D-glucose 4,6-dehydratase Mus musculus
Q9LH76 5.88e-74 244 39 6 343 2 RHM3 Trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM3 Arabidopsis thaliana
O95455 5.06e-73 233 35 5 344 1 TGDS dTDP-D-glucose 4,6-dehydratase Homo sapiens
Q9SYM5 5.95e-73 242 39 7 343 1 RHM1 Trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM1 Arabidopsis thaliana
A6QLW2 9.12e-72 230 35 5 344 2 TGDS dTDP-D-glucose 4,6-dehydratase Bos taurus
Q54WS6 2.16e-69 226 32 5 381 3 tgds dTDP-D-glucose 4,6-dehydratase Dictyostelium discoideum
Q5UR12 2.05e-58 194 35 8 333 1 MIMI_R141 Putative dTDP-D-glucose 4,6-dehydratase Acanthamoeba polyphaga mimivirus
Q9HDU4 3.5e-47 167 31 11 357 3 SPBPB2B2.11 Uncharacterized protein PB2B2.11 Schizosaccharomyces pombe (strain 972 / ATCC 24843)
O06485 2.47e-32 126 26 7 332 3 yfnG Putative sugar dehydratase/epimerase YfnG Bacillus subtilis (strain 168)
P14169 5.44e-31 123 28 13 359 1 rfbE CDP-paratose 2-epimerase Salmonella typhi
F8C4X8 5.6e-31 122 29 11 335 1 TOPB45_0660 UDP-glucuronate 4-epimerase Thermodesulfobacterium geofontis (strain OPF15)
P39858 1.36e-30 122 27 10 353 3 capI Protein CapI Staphylococcus aureus
P9WN67 2.08e-30 121 33 10 341 1 galE1 UDP-glucose 4-epimerase Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WN66 2.08e-30 121 33 10 341 3 galE1 UDP-glucose 4-epimerase Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
Q57664 6.12e-29 117 31 14 335 3 MJ0211 Putative UDP-glucose 4-epimerase Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
A0R5C5 6.17e-28 114 31 9 336 1 MSMEG_6142 UDP-glucose 4-epimerase Mycolicibacterium smegmatis (strain ATCC 700084 / mc(2)155)
Q58455 1.61e-27 113 26 8 354 3 MJ1055 Uncharacterized protein MJ1055 Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
Q9T0A7 4.55e-26 110 29 13 360 1 UGE2 UDP-glucose 4-epimerase 2 Arabidopsis thaliana
O34886 3.05e-25 107 27 10 336 3 ytcB Uncharacterized UDP-glucose epimerase YtcB Bacillus subtilis (strain 168)
Q9SN58 2.55e-24 105 30 18 366 1 UGE5 UDP-glucose 4-epimerase 5 Arabidopsis thaliana
B9J8R3 4.59e-24 104 25 13 370 1 lpsL UDP-glucuronate 4-epimerase Rhizobium rhizogenes (strain K84 / ATCC BAA-868)
Q8VZC0 5.9e-24 105 26 11 336 1 UXS1 UDP-glucuronic acid decarboxylase 1 Arabidopsis thaliana
Q2SYH7 1.69e-23 103 26 10 367 1 wbiB dTDP-L-rhamnose 4-epimerase Burkholderia thailandensis (strain ATCC 700388 / DSM 13276 / CCUG 48851 / CIP 106301 / E264)
O54067 2.14e-23 102 26 13 366 3 lspL Probable UDP-glucuronate 4-epimerase Rhizobium meliloti (strain 1021)
Q6DF08 3.63e-23 103 25 11 335 2 uxs1 UDP-glucuronic acid decarboxylase 1 Xenopus tropicalis
Q5PQX0 9.06e-23 102 24 11 335 1 Uxs1 UDP-glucuronic acid decarboxylase 1 Rattus norvegicus
Q5R885 1.05e-22 101 24 11 335 2 UXS1 UDP-glucuronic acid decarboxylase 1 Pongo abelii
Q91XL3 1.09e-22 101 24 11 335 1 Uxs1 UDP-glucuronic acid decarboxylase 1 Mus musculus
Q8NBZ7 1.09e-22 101 24 11 335 1 UXS1 UDP-glucuronic acid decarboxylase 1 Homo sapiens
Q59083 1.13e-22 100 29 13 348 3 exoB UDP-glucose 4-epimerase Azospirillum brasilense
P33119 3.42e-22 99 28 12 334 3 galE UDP-glucose 4-epimerase Corynebacterium diphtheriae (strain ATCC 700971 / NCTC 13129 / Biotype gravis)
Q6GMI9 4.95e-22 99 24 10 335 1 uxs1 UDP-glucuronic acid decarboxylase 1 Danio rerio
P55180 6.63e-21 95 28 15 357 3 galE UDP-glucose 4-epimerase Bacillus subtilis (strain 168)
Q9ZV36 1.05e-20 95 27 11 328 2 UXS6 UDP-glucuronic acid decarboxylase 6 Arabidopsis thaliana
Q9C7W7 1.4e-20 94 30 16 362 1 UGE4 UDP-glucose 4-epimerase 4 Arabidopsis thaliana
Q6ZDJ7 1.63e-20 95 28 17 363 2 UGE-2 UDP-glucose 4-epimerase 2 Oryza sativa subsp. japonica
Q9KDV3 1.96e-20 94 28 16 349 3 galE UDP-glucose 4-epimerase Halalkalibacterium halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125)
Q9FIE8 2.44e-20 94 25 7 327 1 UXS3 UDP-glucuronic acid decarboxylase 3 Arabidopsis thaliana
Q04871 2.65e-20 93 24 11 357 3 None Uncharacterized 37.6 kDa protein in cld 5'region Escherichia coli O111:H-
Q8LNZ3 3.16e-20 94 29 20 366 2 UGE-1 UDP-glucose 4-epimerase 1 Oryza sativa subsp. japonica
P35673 3.19e-20 93 27 14 354 3 galE UDP-glucose 4-epimerase Erwinia amylovora
P04397 3.26e-20 95 27 16 366 1 GAL10 Bifunctional protein GAL10 Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Q8S8T4 3.38e-20 94 25 11 327 2 UXS4 UDP-glucuronic acid decarboxylase 4 Arabidopsis thaliana
Q7WTB1 4.67e-20 92 27 17 354 2 galE UDP-glucose 4-epimerase Lactobacillus helveticus
Q6K2E1 5.07e-20 93 28 16 360 2 UGE-4 UDP-glucose 4-epimerase 4 Oryza sativa subsp. japonica
Q9LZI2 5.49e-20 94 25 11 327 1 UXS2 UDP-glucuronic acid decarboxylase 2 Arabidopsis thaliana
Q9SN95 9.92e-20 92 25 7 327 2 UXS5 UDP-glucuronic acid decarboxylase 5 Arabidopsis thaliana
P75517 1.29e-19 91 25 11 350 3 galE UDP-glucose 4-epimerase Mycoplasma pneumoniae (strain ATCC 29342 / M129 / Subtype 1)
P13226 1.66e-19 91 28 14 347 3 galE UDP-glucose 4-epimerase Streptomyces lividans
Q04973 1.87e-19 91 27 12 354 3 vipB Vi polysaccharide biosynthesis protein VipB/TviC Salmonella typhi
O84903 4.22e-19 90 27 12 351 3 galE UDP-glucose 4-epimerase Lacticaseibacillus casei
Q59745 4.34e-19 90 29 15 353 3 exoB UDP-glucose 4-epimerase Rhizobium leguminosarum bv. trifolii
O65781 4.9e-19 90 26 16 386 2 None UDP-glucose 4-epimerase GEPI48 Cyamopsis tetragonoloba
Q564Q1 7.79e-19 89 26 14 373 1 gale-1 UDP-glucose 4-epimerase Caenorhabditis elegans
Q6T1X6 1.69e-18 88 27 6 257 1 rmd GDP-6-deoxy-D-mannose reductase Aneurinibacillus thermoaerophilus
Q553X7 4.41e-18 87 26 15 363 1 galE UDP-glucose 4-epimerase Dictyostelium discoideum
P09609 7.66e-18 88 28 11 292 2 GAL10 Bifunctional protein GAL10 Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37)
Q57301 1.93e-17 85 27 15 352 3 galE UDP-glucose 4-epimerase Yersinia enterocolitica
Q9CNY5 1.99e-17 85 26 13 356 3 galE UDP-glucose 4-epimerase Pasteurella multocida (strain Pm70)
Q9F7D4 2.11e-17 85 28 16 357 3 galE UDP-glucose 4-epimerase Yersinia pestis
Q9W0P5 2.24e-17 85 26 16 386 1 Gale UDP-glucose 4-epimerase Drosophila melanogaster
Q3T105 6.06e-17 84 29 20 360 2 GALE UDP-glucose 4-epimerase Bos taurus
P96995 8.27e-17 83 28 14 340 3 galE UDP-glucose 4-epimerase Streptococcus mutans serotype c (strain ATCC 700610 / UA159)
P56985 8.3e-17 84 25 13 359 3 galE UDP-glucose 4-epimerase Neisseria meningitidis serogroup B (strain ATCC BAA-335 / MC58)
Q652A8 9.15e-17 84 27 14 365 2 UGE-3 UDP-glucose 4-epimerase 3 Oryza sativa subsp. japonica
Q8R059 9.77e-17 83 28 17 359 1 Gale UDP-glucose 4-epimerase Mus musculus
Q9LPC1 1.24e-16 84 24 11 347 2 GAE2 UDP-glucuronate 4-epimerase 2 Arabidopsis thaliana
P09147 1.25e-16 83 26 16 356 1 galE UDP-glucose 4-epimerase Escherichia coli (strain K12)
P56986 1.26e-16 83 26 15 360 3 galE UDP-glucose 4-epimerase Neisseria meningitidis serogroup C
B0M3E8 2.07e-16 82 26 18 364 1 UGE1 Bifunctional UDP-glucose 4-epimerase and UDP-xylose 4-epimerase 1 Pisum sativum
Q45291 2.44e-16 82 27 16 337 3 galE UDP-glucose 4-epimerase Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / BCRC 11384 / CCUG 27702 / LMG 3730 / NBRC 12168 / NCIMB 10025 / NRRL B-2784 / 534)
O81312 3.85e-16 82 24 13 348 2 GAE3 UDP-glucuronate 4-epimerase 3 Arabidopsis thaliana
Q9Y7X5 4.93e-16 81 29 8 254 1 uge1 UDP-glucose 4-epimerase uge1 Schizosaccharomyces pombe (strain 972 / ATCC 24843)
P21977 7.81e-16 80 26 13 349 3 galE UDP-glucose 4-epimerase Streptococcus thermophilus
Q9HDU3 9.23e-16 82 25 13 362 3 gal10 Bifunctional protein gal10 Schizosaccharomyces pombe (strain 972 / ATCC 24843)
Q56598 1.25e-15 80 30 6 202 3 gmd GDP-mannose 4,6-dehydratase Vibrio cholerae
O65780 1.3e-15 80 25 14 361 2 None UDP-glucose 4-epimerase GEPI42 Cyamopsis tetragonoloba
P0AC91 1.39e-15 80 26 13 357 3 gmd GDP-mannose 4,6-dehydratase Shigella flexneri
P0AC88 1.39e-15 80 26 13 357 1 gmd GDP-mannose 4,6-dehydratase Escherichia coli (strain K12)
P0AC89 1.39e-15 80 26 13 357 3 gmd GDP-mannose 4,6-dehydratase Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0AC90 1.39e-15 80 26 13 357 3 gmd GDP-mannose 4,6-dehydratase Escherichia coli O157:H7
Q9SUN3 1.59e-15 80 26 13 349 2 At4g20460 Probable UDP-arabinose 4-epimerase 3 Arabidopsis thaliana
Q56093 1.65e-15 80 26 16 356 3 galE UDP-glucose 4-epimerase Salmonella typhi
Q43070 1.83e-15 80 26 18 364 2 GALE UDP-glucose 4-epimerase Pisum sativum
P24325 2.12e-15 79 26 18 359 3 galE UDP-glucose 4-epimerase Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P22715 2.16e-15 79 26 16 356 3 galE UDP-glucose 4-epimerase Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q9FI17 2.55e-15 80 28 14 340 3 At5g44480 Putative UDP-arabinose 4-epimerase 4 Arabidopsis thaliana
Q42605 2.69e-15 79 24 14 360 1 UGE1 Bifunctional UDP-glucose 4-epimerase and UDP-xylose 4-epimerase 1 Arabidopsis thaliana
Q9M0B6 3.27e-15 79 23 14 358 1 GAE1 UDP-glucuronate 4-epimerase 1 Arabidopsis thaliana
P56997 3.56e-15 79 26 15 361 3 galE UDP-glucose 4-epimerase Neisseria meningitidis serogroup A / serotype 4A (strain DSM 15465 / Z2491)
Q9HTB6 4.3e-15 78 25 13 351 1 rmd GDP-6-deoxy-D-mannose reductase Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Q8H0B6 9.13e-15 78 27 13 345 2 UEL-2 Probable UDP-arabinose 4-epimerase 2 Oryza sativa subsp. japonica
Q14376 9.39e-15 77 30 16 297 1 GALE UDP-glucose 4-epimerase Homo sapiens
Q5R8D0 9.48e-15 77 28 18 358 2 GALE UDP-glucose 4-epimerase Pongo abelii
Q9LIS3 1.02e-14 78 24 13 358 1 GAE6 UDP-glucuronate 4-epimerase 6 Arabidopsis thaliana
P55353 1.26e-14 77 21 11 348 3 fcl GDP-L-fucose synthase Sinorhizobium fredii (strain NBRC 101917 / NGR234)
Q67WR2 1.41e-14 77 22 13 349 2 Os06g0652400 Probable GDP-L-fucose synthase 1 Oryza sativa subsp. japonica
O22141 1.65e-14 77 23 11 348 1 GAE4 UDP-glucuronate 4-epimerase 4 Arabidopsis thaliana
P40801 1.8e-14 78 24 11 373 2 GAL10 Bifunctional protein GAL10 Pachysolen tannophilus
Q8H930 2.75e-14 77 28 15 347 2 UEL-1 Probable UDP-arabinose 4-epimerase 1 Oryza sativa subsp. japonica
Q8LDN8 3.22e-14 76 24 14 361 1 UGE3 Bifunctional UDP-glucose 4-epimerase and UDP-xylose 4-epimerase 3 Arabidopsis thaliana
Q06952 3.33e-14 76 29 6 202 3 gmd GDP-mannose 4,6-dehydratase Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
P18645 4.64e-14 75 27 16 357 2 Gale UDP-glucose 4-epimerase Rattus norvegicus
Q7BJX9 1.13e-13 74 25 11 342 1 wbgU UDP-N-acetylglucosamine 4-epimerase Plesiomonas shigelloides
P26503 1.46e-13 74 28 12 346 3 exoB UDP-glucose 4-epimerase Rhizobium meliloti (strain 1021)
Q56872 4.24e-13 73 25 12 361 3 gmd GDP-mannose 4,6-dehydratase Yersinia enterocolitica serotype O:8 / biotype 1B (strain NCTC 13174 / 8081)
Q59678 4.41e-13 72 24 15 358 3 galE UDP-glucose 4-epimerase Mannheimia haemolytica
P55354 7.59e-13 72 29 7 204 3 gmd GDP-mannose 4,6-dehydratase Sinorhizobium fredii (strain NBRC 101917 / NGR234)
P47364 8.19e-13 72 25 11 292 3 galE UDP-glucose 4-epimerase Mycoplasma genitalium (strain ATCC 33530 / DSM 19775 / NCTC 10195 / G37)
P93031 9.09e-13 72 25 8 278 1 MUR1 GDP-mannose 4,6 dehydratase 2 Arabidopsis thaliana
Q8H0B2 2.9e-12 70 27 15 346 2 UEL-3 Probable UDP-arabinose 4-epimerase 3 Oryza sativa subsp. japonica
Q9SNY3 2.93e-12 70 25 7 279 1 GMD1 GDP-mannose 4,6 dehydratase 1 Arabidopsis thaliana
A0A1B4XBH2 2.95e-12 71 26 7 283 3 sdnI GDP-mannose 4,6-dehydratase sdnI Sordaria araneosa
A0A0U3AP28 3.63e-12 70 24 9 265 1 HS5.17 CDP-6-D-glucitol synthase Campylobacter jejuni
O85713 5.54e-12 69 29 7 204 3 gmd GDP-mannose 4,6-dehydratase Rhizobium fredii (strain HH103)
Q9SA77 5.58e-12 70 26 15 346 1 MUR4 UDP-arabinose 4-epimerase 1 Arabidopsis thaliana
Q9STI6 7.55e-12 69 22 9 339 2 GAE5 UDP-glucuronate 4-epimerase 5 Arabidopsis thaliana
Q9LMU0 1.57e-11 68 23 15 351 1 GER2 Putative GDP-L-fucose synthase 2 Arabidopsis thaliana
Q9VMW9 4.45e-11 67 25 10 278 1 Gmd GDP-mannose 4,6 dehydratase Drosophila melanogaster
Q9JRN7 4.53e-11 66 23 9 267 1 tld GDP-6-deoxy-D-talose 4-dehydrogenase Aggregatibacter actinomycetemcomitans
O64749 5.47e-11 67 25 14 345 2 At2g34850 Putative UDP-arabinose 4-epimerase 2 Arabidopsis thaliana
E8MF10 1.1e-10 65 28 21 369 1 lnpD UDP-glucose 4-epimerase Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 / JCM 1217 / NCTC 11818 / E194b)
Q51366 1.12e-10 65 24 8 281 1 gmd GDP-mannose 4,6-dehydratase Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
P32055 1.13e-10 65 22 11 352 1 fcl GDP-L-fucose synthase Escherichia coli (strain K12)
Q84KI6 1.22e-10 66 25 12 297 1 SQD1 UDP-sulfoquinovose synthase, chloroplastic Spinacia oleracea
O45583 2.07e-10 65 27 6 198 1 gmd-2 GDP-mannose 4,6 dehydratase 2 Caenorhabditis elegans
Q67WR5 2.1e-10 65 23 9 347 3 Os06g0652300 Putative GDP-L-fucose synthase 2 Oryza sativa subsp. japonica
Q18801 2.51e-10 65 27 5 196 1 bre-1 GDP-mannose 4,6 dehydratase 1 Caenorhabditis elegans
Q8K3X3 3.16e-10 64 23 9 288 2 GMDS GDP-mannose 4,6 dehydratase Cricetulus griseus
A8Y0L5 3.9e-10 64 28 6 196 3 CBG21737 GDP-mannose 4,6 dehydratase 1 Caenorhabditis briggsae
P26397 4.52e-10 63 24 14 350 1 rfbG CDP-glucose 4,6-dehydratase Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q8K0C9 4.68e-10 63 23 9 288 1 Gmds GDP-mannose 4,6 dehydratase Mus musculus
Q56623 6.41e-10 63 23 12 342 3 galE UDP-glucose 4-epimerase Vibrio cholerae
O49213 8.82e-10 62 22 13 348 1 GER1 GDP-L-fucose synthase 1 Arabidopsis thaliana
Q05026 9.22e-10 62 25 12 285 3 galE UDP-glucose 4-epimerase Neisseria gonorrhoeae
O60547 9.49e-10 63 23 9 287 1 GMDS GDP-mannose 4,6 dehydratase Homo sapiens
O48917 9.75e-10 63 26 15 298 1 SQD1 UDP-sulfoquinovose synthase, chloroplastic Arabidopsis thaliana
B2JF12 1.41e-09 62 24 11 347 3 hldD ADP-L-glycero-D-manno-heptose-6-epimerase Paraburkholderia phymatum (strain DSM 17167 / CIP 108236 / LMG 21445 / STM815)
Q1ZXF7 1.64e-09 62 23 10 350 1 gmd GDP-mannose 4,6 dehydratase Dictyostelium discoideum
Q0P9D4 1.73e-09 62 31 4 140 1 pglF UDP-N-acetyl-alpha-D-glucosamine C6 dehydratase Campylobacter jejuni subsp. jejuni serotype O:2 (strain ATCC 700819 / NCTC 11168)
Q0BH85 1.79e-09 62 25 12 345 3 hldD ADP-L-glycero-D-manno-heptose-6-epimerase Burkholderia ambifaria (strain ATCC BAA-244 / DSM 16087 / CCUG 44356 / LMG 19182 / AMMD)
B1YV41 2.19e-09 61 25 12 345 3 hldD ADP-L-glycero-D-manno-heptose-6-epimerase Burkholderia ambifaria (strain MC40-6)
A9ADU8 2.87e-09 61 25 12 348 3 hldD ADP-L-glycero-D-manno-heptose-6-epimerase Burkholderia multivorans (strain ATCC 17616 / 249)
Q39IF3 3.61e-09 60 25 12 347 3 hldD ADP-L-glycero-D-manno-heptose-6-epimerase Burkholderia lata (strain ATCC 17760 / DSM 23089 / LMG 22485 / NCIMB 9086 / R18194 / 383)
A4JCI2 4.92e-09 60 25 12 347 3 hldD ADP-L-glycero-D-manno-heptose-6-epimerase Burkholderia vietnamiensis (strain G4 / LMG 22486)
Q72ET7 6.13e-09 60 27 11 272 3 hldD ADP-L-glycero-D-manno-heptose-6-epimerase Nitratidesulfovibrio vulgaris (strain ATCC 29579 / DSM 644 / CCUG 34227 / NCIMB 8303 / VKM B-1760 / Hildenborough)
Q1BY20 8.35e-09 60 24 12 348 3 hldD ADP-L-glycero-D-manno-heptose-6-epimerase Burkholderia orbicola (strain AU 1054)
B1JXS7 8.35e-09 60 24 12 348 3 hldD ADP-L-glycero-D-manno-heptose-6-epimerase Burkholderia orbicola (strain MC0-3)
A0K5M9 8.35e-09 60 24 12 348 3 hldD ADP-L-glycero-D-manno-heptose-6-epimerase Burkholderia cenocepacia (strain HI2424)
Q9JRN5 8.66e-09 60 22 13 356 1 gmd GDP-mannose 4,6-dehydratase Aggregatibacter actinomycetemcomitans
Q6E7F2 9.32e-09 59 23 14 335 1 fcf1 dTDP-4-dehydro-6-deoxyglucose reductase Escherichia coli
B4EB34 1.09e-08 59 24 12 347 3 hldD ADP-L-glycero-D-manno-heptose-6-epimerase Burkholderia cenocepacia (strain ATCC BAA-245 / DSM 16553 / LMG 16656 / NCTC 13227 / J2315 / CF5610)
I1WGR6 2.04e-08 58 24 11 347 3 hldD ADP-L-glycero-D-manno-heptose-6-epimerase Burkholderia pseudomallei (strain 1026b)
Q2SY18 2.11e-08 58 24 11 347 1 hldD ADP-L-glycero-D-manno-heptose-6-epimerase Burkholderia thailandensis (strain ATCC 700388 / DSM 13276 / CCUG 48851 / CIP 106301 / E264)
A1VGB0 2.28e-08 58 27 11 272 3 hldD ADP-L-glycero-D-manno-heptose-6-epimerase Nitratidesulfovibrio vulgaris (strain DP4)
P0A1P4 3.58e-08 57 20 10 336 1 rfbJ CDP-abequose synthase Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q13VD0 4.78e-08 57 24 8 302 3 hldD ADP-L-glycero-D-manno-heptose-6-epimerase Paraburkholderia xenovorans (strain LB400)
A3NC24 4.78e-08 57 24 11 347 3 hldD ADP-L-glycero-D-manno-heptose-6-epimerase Burkholderia pseudomallei (strain 668)
Q3JPY8 4.78e-08 57 24 11 347 3 hldD ADP-L-glycero-D-manno-heptose-6-epimerase Burkholderia pseudomallei (strain 1710b)
A3NXW3 4.78e-08 57 24 11 347 3 hldD ADP-L-glycero-D-manno-heptose-6-epimerase Burkholderia pseudomallei (strain 1106a)
A1V6L4 4.78e-08 57 24 11 347 3 hldD ADP-L-glycero-D-manno-heptose-6-epimerase Burkholderia mallei (strain SAVP1)
Q62M34 4.78e-08 57 24 11 347 3 hldD ADP-L-glycero-D-manno-heptose-6-epimerase Burkholderia mallei (strain ATCC 23344)
A2S4R1 4.78e-08 57 24 11 347 3 hldD ADP-L-glycero-D-manno-heptose-6-epimerase Burkholderia mallei (strain NCTC 10229)
A3MHP7 4.78e-08 57 24 11 347 3 hldD ADP-L-glycero-D-manno-heptose-6-epimerase Burkholderia mallei (strain NCTC 10247)
Q3A8K5 8.8e-08 56 28 11 263 3 hldD ADP-L-glycero-D-manno-heptose-6-epimerase Syntrophotalea carbinolica (strain DSM 2380 / NBRC 103641 / GraBd1)
P0DMK5 9.6e-08 56 24 11 346 3 hldD ADP-L-glycero-D-manno-heptose-6-epimerase Burkholderia pseudomallei (strain K96243)
P56600 1.07e-07 54 30 4 139 3 GAL10 Bifunctional protein GAL10 (Fragment) Candida maltosa
G4WJD3 1.44e-07 55 21 15 350 1 colC GDP-L-colitose synthase Yersinia pseudotuberculosis
P45602 1.62e-07 53 29 5 141 3 galE UDP-glucose 4-epimerase (Fragment) Klebsiella pneumoniae
Q5SFA6 2.13e-07 55 21 12 344 1 chmD dTDP-4-dehydro-6-deoxy-D-allose reductase Streptomyces bikiniensis
Q47GJ3 2.79e-07 55 24 14 354 3 hldD ADP-L-glycero-D-manno-heptose-6-epimerase Dechloromonas aromatica (strain RCB)
Q331Q7 3.09e-07 55 22 11 344 1 gerKI dTDP-4-dehydro-6-deoxy-D-allose reductase Streptomyces sp.
C4K8I6 3.37e-07 55 27 11 258 3 hldD ADP-L-glycero-D-manno-heptose-6-epimerase Hamiltonella defensa subsp. Acyrthosiphon pisum (strain 5AT)
B2T625 3.44e-07 55 24 8 301 3 hldD ADP-L-glycero-D-manno-heptose-6-epimerase Paraburkholderia phytofirmans (strain DSM 17436 / LMG 22146 / PsJN)
A3QJB2 3.93e-07 54 24 10 267 3 hldD ADP-L-glycero-D-manno-heptose-6-epimerase Shewanella loihica (strain ATCC BAA-1088 / PV-4)
Q58461 6.2e-07 54 23 14 308 3 MJ1061 Uncharacterized membrane protein MJ1061 Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
P44094 1.2e-06 53 25 12 235 1 denD D-erythronate dehydrogenase Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
G5EER4 1.31e-06 53 22 14 353 1 ger-1 GDP-L-fucose synthase Caenorhabditis elegans
Q13630 1.57e-06 52 22 10 344 1 GFUS GDP-L-fucose synthase Homo sapiens
A2Z7B3 1.57e-06 53 22 13 345 2 OsI_032456 GDP-mannose 3,5-epimerase 1 Oryza sativa subsp. indica
A3C4S4 2.18e-06 52 22 13 345 1 GME-1 GDP-mannose 3,5-epimerase 1 Oryza sativa subsp. japonica
A6V291 2.76e-06 52 25 11 297 3 hldD ADP-L-glycero-D-manno-heptose-6-epimerase Pseudomonas aeruginosa (strain PA7)
Q0A4T8 3.1e-06 52 26 8 264 3 hldD ADP-L-glycero-D-manno-heptose-6-epimerase Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1)
O66251 3.83e-06 51 22 10 327 1 rmlD dTDP-4-dehydrorhamnose reductase Aggregatibacter actinomycetemcomitans
P55584 5.47e-06 51 20 11 358 3 NGR_a02300 Uncharacterized protein y4nL Sinorhizobium fredii (strain NBRC 101917 / NGR234)
P39631 6.01e-06 50 25 7 204 3 spsK Spore coat polysaccharide biosynthesis protein SpsK Bacillus subtilis (strain 168)
Q7CRQ0 6.67e-06 50 27 10 197 1 udh Uronate dehydrogenase Agrobacterium fabrum (strain C58 / ATCC 33970)
Q07W60 7.75e-06 50 26 13 273 3 hldD ADP-L-glycero-D-manno-heptose-6-epimerase Shewanella frigidimarina (strain NCIMB 400)
P39853 8.27e-06 51 22 11 344 3 capD Capsular polysaccharide biosynthesis protein CapD Staphylococcus aureus
Q1LQG2 1.02e-05 50 25 10 291 3 hldD ADP-L-glycero-D-manno-heptose-6-epimerase Cupriavidus metallidurans (strain ATCC 43123 / DSM 2839 / NBRC 102507 / CH34)
Q8K3X2 1.18e-05 50 26 7 252 2 GFUS GDP-L-fucose synthase Cricetulus griseus
C0QZ84 1.28e-05 50 22 13 334 3 hldD ADP-L-glycero-D-manno-heptose-6-epimerase Brachyspira hyodysenteriae (strain ATCC 49526 / WA1)
P23591 1.28e-05 50 22 11 344 1 Gfus GDP-L-fucose synthase Mus musculus
Q31FG4 2.84e-05 48 22 13 361 3 hldD ADP-L-glycero-D-manno-heptose-6-epimerase Hydrogenovibrio crunogenus (strain DSM 25203 / XCL-2)
Q49VA1 3.33e-05 48 24 7 195 3 SSP2164 Uncharacterized epimerase/dehydratase SSP2164 Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229 / NCIMB 8711 / NCTC 7292 / S-41)
Q9ZUY6 3.58e-05 48 22 15 373 1 AXS1 UDP-D-apiose/UDP-D-xylose synthase 1 Arabidopsis thaliana
P71052 4.94e-05 48 28 1 114 3 epsC Probable polysaccharide biosynthesis protein EpsC Bacillus subtilis (strain 168)
A1JPN5 5.33e-05 48 22 14 356 3 arnA Bifunctional polymyxin resistance protein ArnA Yersinia enterocolitica serotype O:8 / biotype 1B (strain NCTC 13174 / 8081)
Q9HYQ8 6.92e-05 47 25 11 296 3 hldD ADP-L-glycero-D-manno-heptose-6-epimerase Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
A1TYR6 7.1e-05 47 24 8 276 3 hldD ADP-L-glycero-D-manno-heptose-6-epimerase Marinobacter nauticus (strain ATCC 700491 / DSM 11845 / VT8)
A9IJJ7 7.11e-05 47 27 6 194 3 hldD ADP-L-glycero-D-manno-heptose-6-epimerase Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448)
Q5RBE5 7.3e-05 47 21 10 344 2 GFUS GDP-L-fucose synthase Pongo abelii
Q02QH1 9.9e-05 47 25 11 296 3 hldD ADP-L-glycero-D-manno-heptose-6-epimerase Pseudomonas aeruginosa (strain UCBPP-PA14)
D4GU71 0.000154 46 32 8 168 3 agl14 Probable low-salt glycan biosynthesis reductase Agl14 Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2)
Q9CL97 0.000177 46 24 9 272 3 hldD ADP-L-glycero-D-manno-heptose-6-epimerase Pasteurella multocida (strain Pm70)
Q5HIC2 0.000228 46 25 8 196 3 SACOL0599 Uncharacterized epimerase/dehydratase SACOL0599 Staphylococcus aureus (strain COL)
Q99W56 0.000228 46 25 8 196 3 SAV0553 Uncharacterized epimerase/dehydratase SAV0553 Staphylococcus aureus (strain Mu50 / ATCC 700699)
Q2FJ87 0.000228 46 25 8 196 3 SAUSA300_0538 Uncharacterized epimerase/dehydratase SAUSA300_0538 Staphylococcus aureus (strain USA300)
Q2G0M5 0.000228 46 25 8 196 3 SAOUHSC_00535 Uncharacterized epimerase/dehydratase SAOUHSC_00535 Staphylococcus aureus (strain NCTC 8325 / PS 47)
Q6GBT4 0.000228 46 25 8 196 3 SAS0511 Uncharacterized epimerase/dehydratase SAS0511 Staphylococcus aureus (strain MSSA476)
Q7A788 0.000228 46 25 8 196 1 SA0511 Uncharacterized epimerase/dehydratase SA0511 Staphylococcus aureus (strain N315)
Q7A1Q7 0.000228 46 25 8 196 3 MW0508 Uncharacterized epimerase/dehydratase MW0508 Staphylococcus aureus (strain MW2)
A6VLD2 0.000245 46 27 11 259 3 hldD ADP-L-glycero-D-manno-heptose-6-epimerase Actinobacillus succinogenes (strain ATCC 55618 / DSM 22257 / CCUG 43843 / 130Z)
A9X4U2 0.000261 46 21 12 360 2 3BETAHSD/D3 3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 3 Arabidopsis thaliana
B3R3C0 0.000263 46 23 7 289 3 hldD ADP-L-glycero-D-manno-heptose-6-epimerase Cupriavidus taiwanensis (strain DSM 17343 / BCRC 17206 / CCUG 44338 / CIP 107171 / LMG 19424 / R1)
Q8PDW5 0.000267 46 28 7 176 1 oleD 2-alkyl-3-oxoalkanoate reductase Xanthomonas campestris pv. campestris (strain ATCC 33913 / DSM 3586 / NCPPB 528 / LMG 568 / P 25)
Q12CM2 0.000276 46 27 11 247 3 hldD ADP-L-glycero-D-manno-heptose-6-epimerase Polaromonas sp. (strain JS666 / ATCC BAA-500)
Q888H1 0.000367 45 23 12 259 1 udh Uronate dehydrogenase Pseudomonas syringae pv. tomato (strain ATCC BAA-871 / DC3000)
I1S4E7 0.000546 45 22 12 306 3 ERG26 Sterol-4-alpha-carboxylate 3-dehydrogenase ERG26, decarboxylating Gibberella zeae (strain ATCC MYA-4620 / CBS 123657 / FGSC 9075 / NRRL 31084 / PH-1)
Q3SK74 0.000563 45 25 14 286 3 hldD ADP-L-glycero-D-manno-heptose-6-epimerase Thiobacillus denitrificans (strain ATCC 25259)
Q5R4E0 0.000571 45 25 4 170 2 MAT2B Methionine adenosyltransferase 2 subunit beta Pongo abelii
Q9NZL9 0.000571 45 25 4 170 1 MAT2B Methionine adenosyltransferase 2 subunit beta Homo sapiens
G3XMB9 0.000631 45 32 4 117 2 azaE Ketoreductase azaE Aspergillus niger (strain ATCC 1015 / CBS 113.46 / FGSC A1144 / LSHB Ac4 / NCTC 3858a / NRRL 328 / USDA 3528.7)
P55579 0.000659 45 22 14 362 3 NGR_a02350 Uncharacterized protein y4nG Sinorhizobium fredii (strain NBRC 101917 / NGR234)
Q6GJB5 0.00069 44 25 8 196 3 SAR0558 Uncharacterized epimerase/dehydratase SAR0558 Staphylococcus aureus (strain MRSA252)
P22072 0.000736 44 27 6 177 2 Hsd3b 3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase type 2 Rattus norvegicus
Q2YSA8 0.000747 44 24 8 196 3 SAB0504 Uncharacterized epimerase/dehydratase SAB0504 Staphylococcus aureus (strain bovine RF122 / ET3-1)
A0A7L9EYL1 0.000763 45 23 8 255 1 xenE Hybrid PKS-NRPS synthetase xenE Xenoacremonium sinensis
A1KBH4 0.000804 44 27 12 272 3 hldD ADP-L-glycero-D-manno-heptose-6-epimerase Azoarcus sp. (strain BH72)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS18790
Feature type CDS
Gene rffG
Product dTDP-glucose 4,6-dehydratase
Location 27549 - 28628 (strand: 1)
Length 1080 (nucleotides) / 359 (amino acids)

Contig

Accession term accessions NZ_VXKB01000010 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 36620 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1332
Orthogroup size 7
N. genomes 7

Actions

Genomic region

Domains

PF16363 GDP-mannose 4,6 dehydratase

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1088 Cell wall/membrane/envelope biogenesis (M) M dTDP-D-glucose 4,6-dehydratase

Kegg Ortholog Annotation(s)

Virulence factor Annotation(s)

VF gene ID Protein VF ID Category
VFG007659 dTDP-glucose 4,6-dehydratase VF0624 Immune modulation

Protein Sequence

MALKRILVTGGAGFIGSAVVRHIIRDTADSVVVVDKLTYAGNLESLAPVADDARYTFEQVDICDRAALDRVFAQYQPDAVMHLAAESHVDRSIDGPADFIETNIVGTYTLLEAARHYWQALDAEKKSAFRFHHISTDEVYGDLEGPDGFFTETTPYAPSSPYSASKASSDHLVRAWLRTYGFPTIITNCSNNYGPYHFPEKLIPLVILNAISGKPLPVYGKGEQIRDWLFVDDHARALYTVVTQAKVGETYNIGGHNERKNIQVVETICSLLEELYPQKPAGVAQYRDLITYVTDRPGHDLRYAIDADKIERDLGWRPQETFESGIRKTVEWYLNNETWWSRVQDGSYAGQRLGLESDK

Flanking regions ( +/- flanking 50bp)

ATTCCGGGCAGCCAGATCCCGCAGAAATGGATCATCGACACCAAAGGAGTATGGCGTTGAAACGCATTTTAGTGACAGGCGGAGCCGGTTTTATCGGCTCTGCTGTTGTTCGTCATATTATCCGTGATACGGCTGACAGTGTGGTGGTGGTTGATAAACTGACCTACGCCGGGAACCTTGAGTCCCTGGCGCCGGTCGCTGATGACGCGCGCTATACCTTTGAACAGGTTGATATTTGCGACCGCGCGGCACTTGACCGCGTGTTTGCACAGTATCAGCCGGATGCCGTGATGCATCTGGCAGCCGAAAGTCATGTTGACCGCTCCATTGATGGTCCGGCTGATTTTATCGAAACTAACATTGTGGGCACTTACACACTGTTGGAGGCCGCGCGGCATTACTGGCAGGCGCTGGATGCAGAGAAAAAATCCGCTTTCCGTTTTCATCATATCTCCACTGATGAAGTGTATGGTGACCTGGAAGGACCGGATGGCTTTTTCACTGAAACCACACCGTATGCACCGAGCAGCCCGTATTCTGCATCCAAAGCGTCCAGTGACCATCTGGTGCGCGCCTGGCTGCGGACTTACGGCTTCCCGACCATTATTACCAACTGCTCAAATAATTACGGACCGTATCACTTTCCGGAAAAACTGATCCCGCTGGTGATCCTCAATGCGATCTCAGGCAAACCGCTGCCGGTTTACGGTAAAGGCGAGCAGATCCGCGACTGGCTGTTTGTAGATGATCATGCGCGCGCACTGTATACGGTTGTCACGCAGGCAAAAGTTGGCGAAACCTATAATATCGGCGGTCATAATGAGCGCAAAAATATTCAGGTTGTCGAAACCATCTGTTCACTGCTGGAAGAACTGTATCCTCAAAAGCCCGCCGGTGTTGCTCAGTACCGCGATTTAATCACTTATGTGACTGATCGCCCTGGTCATGACCTGCGCTATGCGATTGATGCTGACAAAATTGAGCGTGACCTTGGCTGGCGTCCGCAGGAAACCTTTGAGTCCGGGATACGCAAAACCGTGGAATGGTATCTGAATAATGAAACCTGGTGGAGCCGGGTGCAGGACGGCTCTTATGCCGGACAGCGCCTCGGGCTGGAAAGCGATAAGTAAGGGACTGATATGAAAGGTATTATTCTGGCCGGTGGCTCCGGCACCCGGCT