Homologs in group_33

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14 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_08950 FBDBKF_08950 26.6 Morganella morganii S1 hipB Transcriptional regulator, contains XRE-family HTH domain
FBDBKF_09005 FBDBKF_09005 28.4 Morganella morganii S1 hipB Transcriptional regulator, contains XRE-family HTH domain
EHELCC_10405 EHELCC_10405 28.4 Morganella morganii S2 hipB Transcriptional regulator, contains XRE-family HTH domain
EHELCC_10460 EHELCC_10460 26.6 Morganella morganii S2 hipB Transcriptional regulator, contains XRE-family HTH domain
NLDBIP_10750 NLDBIP_10750 28.4 Morganella morganii S4 hipB Transcriptional regulator, contains XRE-family HTH domain
NLDBIP_10805 NLDBIP_10805 26.6 Morganella morganii S4 hipB Transcriptional regulator, contains XRE-family HTH domain
LHKJJB_10550 LHKJJB_10550 26.6 Morganella morganii S3 hipB Transcriptional regulator, contains XRE-family HTH domain
LHKJJB_10605 LHKJJB_10605 28.4 Morganella morganii S3 hipB Transcriptional regulator, contains XRE-family HTH domain
HKOGLL_13610 HKOGLL_13610 26.6 Morganella morganii S5 hipB Transcriptional regulator, contains XRE-family HTH domain
HKOGLL_13665 HKOGLL_13665 28.4 Morganella morganii S5 hipB Transcriptional regulator, contains XRE-family HTH domain
F4V73_RS10965 F4V73_RS10965 25.0 Morganella psychrotolerans - helix-turn-helix transcriptional regulator
F4V73_RS11020 F4V73_RS11020 26.6 Morganella psychrotolerans - helix-turn-helix transcriptional regulator
PMI_RS01265 PMI_RS01265 27.6 Proteus mirabilis HI4320 - helix-turn-helix transcriptional regulator
PMI_RS01315 PMI_RS01315 27.4 Proteus mirabilis HI4320 mrpJ transcriptional regulator MrpJ

Distribution of the homologs in the orthogroup group_33

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_33

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS18495
Feature type CDS
Gene -
Product mobile mystery protein A
Location 35401 - 35892 (strand: 1)
Length 492 (nucleotides) / 163 (amino acids)

Contig

Accession term accessions NZ_VXKB01000009 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 74461 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_33
Orthogroup size 15
N. genomes 7

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Genomic region

Domains

PF01381 Helix-turn-helix

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1396 Transcription (K) K Transcriptional regulator, contains XRE-family HTH domain

Protein Sequence

MNVLKPINTENTVKQTVIRQYRATANSSLDHKLPRPPKEGWVRTIRKALGMSGTQLADRLGLSRNRISVLERKEAEGDVTLTQLRELAEQLNCDLTYALIPRKPIEEIIEDRATEIAIQSLDTNSQNMFLEAQSIDKEAQTRLMEQIKKDIIASGGRILWRKY

Flanking regions ( +/- flanking 50bp)

TTTTTTTTTGATTACAATACAAACAATGAATCAAAATAAGAGAAGATACGATGAATGTGCTCAAACCGATAAACACTGAAAATACGGTTAAACAGACAGTAATCCGGCAGTACAGAGCTACTGCCAACTCATCTCTTGATCACAAATTACCCCGCCCCCCGAAAGAGGGATGGGTGCGGACTATCCGAAAAGCTCTAGGTATGTCCGGTACTCAGCTTGCAGACAGGTTAGGTTTAAGCAGAAACAGAATATCGGTGCTTGAACGGAAAGAAGCGGAAGGCGACGTTACACTGACTCAATTAAGAGAACTCGCAGAACAGCTAAATTGTGACCTTACCTATGCTCTGATCCCCAGAAAACCAATCGAAGAAATCATTGAAGACAGAGCAACCGAAATAGCAATTCAGAGCCTGGATACCAACTCTCAAAATATGTTTTTAGAAGCACAATCTATTGATAAAGAAGCACAAACCCGCCTTATGGAACAGATAAAGAAGGATATCATTGCATCTGGTGGCCGCATTCTCTGGCGTAAATATTAAGGAGTGATTTTTGACCCTGTCAGCCGATAACCCGATAGGAGCGACCCCGC