Homologs in group_4234

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0 homologs were identified in 0 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product

Distribution of the homologs in the orthogroup group_4234

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_4234

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P75426 1.9e-07 56 25 8 218 3 dnaG DNA primase Mycoplasma pneumoniae (strain ATCC 29342 / M129 / Subtype 1)
P05096 3.07e-07 55 23 15 325 1 dnaG DNA primase Bacillus subtilis (strain 168)
Q9PPZ6 8.9e-05 48 23 8 211 3 dnaG DNA primase Ureaplasma parvum serovar 3 (strain ATCC 700970)
P30103 0.000858 45 28 6 152 3 dnaG DNA primase Rickettsia prowazekii (strain Madrid E)
Q1RKH8 0.001 44 30 7 152 3 dnaG DNA primase Rickettsia bellii (strain RML369-C)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS18075
Feature type CDS
Gene -
Product DNA primase
Location 59344 - 60468 (strand: -1)
Length 1125 (nucleotides) / 374 (amino acids)

Contig

Accession term accessions NZ_VXKB01000008 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 103951 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_4234
Orthogroup size 1
N. genomes 1

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Genomic region

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0358 Replication, recombination and repair (L) L DNA primase (bacterial type)

Protein Sequence

MSTNAEIIEKLAELDIEQYFDIEGITYKRTTGKSGLELNVRECPMCGNCDWKVYVNPKNGLGNCFAGSHPVEKQFNKLRFIQQHSGLYGATLNKYVDNQLLEQGWRPKTKDVKLESAVDLKQEVVLPPHYMLPLPDGRLPDYLVERNVSAELVKYFDLRFIVNGIHAYFDFNKKVATQDFSMRVLIPIYNLIGELCTFQGRDVTGTASKKYLFPSSMPASGRYLYNGHNAFGKSTVVVLEGVFDVFAVKRAMFSDEALREHVEPIGTFGMHLSGGMGAETQDQIGSFLALKSAGLRNVILMWDSEKKAIHNTIKSAKKLRSIGLNVKIAAFKKEGQDAGESSDEDILTAYYRSKPFNDKLALEMMVRGHKAISL

Flanking regions ( +/- flanking 50bp)

TATTAATCCGGTATGACTCTGCCTGTTAAAGCGATAAACGTGAGTACGCCATGAGCACCAACGCCGAAATCATTGAAAAATTAGCAGAGCTAGATATCGAGCAATATTTTGATATCGAGGGGATAACATACAAACGAACGACCGGTAAATCCGGGCTTGAGTTGAATGTTCGTGAATGCCCGATGTGTGGCAACTGTGACTGGAAAGTCTACGTCAATCCGAAAAATGGTTTAGGCAACTGTTTCGCCGGCAGTCACCCTGTTGAAAAGCAATTCAACAAGCTGAGATTCATCCAGCAGCATTCAGGTCTGTACGGTGCAACGCTGAACAAATACGTCGATAACCAGTTGCTTGAGCAGGGCTGGCGACCGAAAACAAAAGACGTAAAGCTGGAAAGTGCCGTAGATTTAAAGCAGGAAGTTGTATTACCTCCGCATTACATGCTGCCGCTGCCTGACGGACGGTTGCCGGATTATCTGGTTGAACGTAACGTATCGGCCGAACTGGTTAAATATTTTGATTTACGCTTTATCGTCAACGGAATACATGCCTACTTCGACTTTAACAAAAAAGTCGCTACGCAGGATTTTTCGATGCGGGTTCTGATTCCAATCTACAATCTCATCGGTGAGCTTTGTACTTTTCAGGGACGTGACGTAACCGGCACTGCCAGTAAAAAATACTTATTCCCGTCTTCCATGCCAGCTTCCGGACGTTATCTCTATAACGGCCACAACGCATTCGGGAAATCGACTGTGGTAGTTCTGGAGGGCGTTTTTGACGTGTTTGCTGTTAAGCGAGCCATGTTCTCAGATGAGGCATTAAGAGAGCATGTAGAGCCTATCGGCACGTTTGGGATGCACCTGTCTGGCGGTATGGGGGCGGAAACTCAGGATCAGATAGGTAGTTTTCTTGCGCTTAAATCGGCTGGTCTGCGAAACGTGATCCTGATGTGGGACTCTGAAAAAAAGGCGATACACAACACGATAAAGTCGGCAAAAAAGCTACGCTCCATCGGACTGAACGTGAAGATCGCAGCATTTAAAAAAGAGGGTCAGGATGCCGGTGAGTCCAGTGATGAGGATATTTTGACAGCCTATTATCGGTCAAAACCATTCAACGATAAACTGGCGCTGGAAATGATGGTGCGAGGCCACAAAGCCATTTCTTTATGAAGATAGGTATTCACATACCTTTAAAATGTATAAGATAACCAAACAACGAG