Homologs in group_3865

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1 homologs were identified in 1 genome with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
PMI_RS12070 PMI_RS12070 30.2 Proteus mirabilis HI4320 - VWA domain-containing protein

Distribution of the homologs in the orthogroup group_3865

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3865

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P29934 7.02e-15 82 26 6 245 1 cobT Aerobic cobaltochelatase subunit CobT Sinorhizobium sp.
O31849 1.1e-05 52 21 9 266 3 yojO Uncharacterized protein YojO Bacillus subtilis (strain 168)
Q18DN4 0.000355 48 22 5 210 3 hmu Halomucin Haloquadratum walsbyi (strain DSM 16790 / HBSQ001)
Q18DN4 0.000863 47 22 3 161 3 hmu Halomucin Haloquadratum walsbyi (strain DSM 16790 / HBSQ001)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS18025
Feature type CDS
Gene -
Product porphyrin biosynthesis protein
Location 48903 - 51266 (strand: -1)
Length 2364 (nucleotides) / 787 (amino acids)

Contig

Accession term accessions NZ_VXKB01000008 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 103951 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3865
Orthogroup size 2
N. genomes 2

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Genomic region

Domains

PF06213 Cobalamin biosynthesis protein CobT
PF11775 Cobalamin biosynthesis protein CobT VWA domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG4548 Inorganic ion transport and metabolism (P) P Nitric oxide reductase activation protein

Kegg Ortholog Annotation(s)

Protein Sequence

MAIKPGIRDEVLSFRESVQTVVSLLSSKKIRVVDYGTKAYCAYNKKTGELEYINIPSIPDTASDALLNAIRGFIDHEVAHVLFTDQSIAKLLDGKKAFHVWNVIEDTFIERKMALMFPGSRKNLIKTQQHIINSFFGKNIKDLINACGSDTRKMFLEVFLMPVSRALCGHTPFIDFMEPYWDWFESEMAILDSFNYRVRINRITKSEGAAKLAADLIKAFRVADEKAAEEKSKKEDKDKLPDPSKKASEETKPGDEDGESSDKPEPTDEKSEDKAEKITEDDKASYKEKDEHDKVSDDTYDTSSDTDDNPDNIEEDTPETDEFSSDEPDETPEPDGDGLPDLTPDRESEEKPESKSDELGESSDEKSKAGTDELSGGSGGAGSGDTGEEPSHLDIGGDEDHDDPAETPLSDSKSDPDGDGEPADDGESLSESDKKELESDDAPETLSTEDAANDMISEEIKSVGARTYTPLTRSNDFIGLLENAHAFIKKTPKELTDGVLWNVDCKDYVFNEKNGLMLFRRYVEPRLSAKSQTLSKDLERAIASKNRVQKVNGLRRGKINSSSLWKVAVPAINDDRVFFKKHDHKAVNAAVQLVIDLSGSMGGSRIEIAVAAAYVLSDALDRIKIPNIITGFTTAGCMGVSSSRSASRIEPLFMPTLKNWNEKANSSTCMARLGLCTNSIPLANNADGESILALAHHHNGRTEDKQIMLVLSDGAPCAAGRGFSGHLVDVVDFITNKTAIDILAVGIQSSAPAHYYKHHTEVDSVDDLPKTVISAIRNLLLTGKAGF

Flanking regions ( +/- flanking 50bp)

TTTTTTTATTGTTTCCACATCCCAAAATGCAGCAAAAAGGAAAATGAAAAATGGCAATAAAACCAGGTATCAGAGATGAGGTGCTGTCGTTCCGCGAGTCGGTTCAGACAGTCGTGAGTCTGTTATCCTCAAAGAAAATCCGTGTCGTGGATTACGGTACGAAAGCATACTGCGCGTACAATAAAAAGACTGGTGAGCTGGAGTACATCAACATCCCGTCCATTCCTGACACAGCCTCGGATGCTCTGCTGAATGCTATCCGTGGTTTCATCGATCATGAAGTCGCACACGTCCTTTTCACCGATCAGTCCATCGCCAAACTGCTCGACGGCAAAAAAGCATTTCACGTTTGGAACGTGATTGAAGACACGTTTATCGAGCGTAAAATGGCGCTCATGTTTCCGGGTAGCCGGAAAAATCTGATTAAAACTCAACAGCATATTATCAATAGCTTTTTCGGGAAAAATATAAAAGACCTGATAAACGCTTGCGGATCTGACACCCGTAAAATGTTCCTTGAAGTGTTCCTGATGCCGGTATCTCGCGCACTCTGCGGACATACGCCGTTTATCGATTTTATGGAGCCGTATTGGGACTGGTTTGAGTCGGAAATGGCGATACTGGACTCATTTAATTACCGCGTTCGCATCAACCGTATTACCAAATCAGAGGGTGCGGCGAAGCTGGCGGCGGATTTGATTAAAGCGTTCCGCGTAGCGGATGAAAAAGCGGCAGAAGAAAAGTCGAAAAAAGAGGACAAAGATAAACTACCTGACCCGTCTAAAAAGGCAAGCGAAGAAACGAAACCGGGTGATGAAGACGGTGAGTCGTCCGATAAGCCGGAACCTACTGATGAAAAGTCAGAGGATAAAGCTGAAAAAATAACTGAGGACGACAAAGCCTCATATAAAGAAAAGGACGAACACGATAAGGTTTCTGATGATACGTATGATACGTCTTCAGATACCGATGATAATCCAGATAATATAGAAGAAGATACGCCGGAAACAGATGAATTTAGCAGTGACGAGCCTGACGAAACTCCGGAGCCTGATGGTGACGGTTTGCCAGACTTAACACCAGATCGGGAGTCAGAAGAAAAACCCGAATCAAAATCTGACGAGTTAGGTGAAAGTTCTGATGAAAAATCCAAAGCTGGAACTGATGAATTAAGCGGAGGTTCTGGTGGAGCTGGTAGTGGTGATACAGGTGAAGAACCGTCCCACCTCGATATCGGCGGCGATGAGGATCATGACGACCCCGCCGAAACACCACTTTCTGACAGTAAGTCCGATCCTGACGGCGATGGCGAACCCGCTGATGATGGTGAATCCCTGTCTGAAAGTGACAAAAAAGAGCTTGAGTCCGACGACGCGCCGGAAACTCTGAGCACCGAAGACGCGGCAAACGATATGATTTCAGAAGAAATAAAGTCTGTCGGTGCGAGAACATACACGCCGCTCACACGATCTAATGACTTTATCGGGTTGTTAGAAAACGCTCATGCGTTTATCAAAAAAACGCCTAAAGAACTTACAGACGGTGTTTTGTGGAATGTTGATTGCAAAGACTATGTTTTCAATGAGAAAAACGGATTGATGCTTTTCCGCCGTTATGTGGAGCCTCGCCTGTCCGCTAAATCTCAAACATTGTCAAAAGACCTCGAACGAGCCATTGCCAGTAAAAACCGTGTTCAGAAAGTAAATGGACTGAGACGCGGAAAAATTAACTCGTCCAGCCTTTGGAAAGTGGCTGTTCCGGCTATCAATGATGATCGCGTATTCTTTAAAAAGCATGATCACAAAGCGGTAAACGCAGCGGTACAGCTTGTTATCGACTTATCCGGCTCTATGGGTGGTTCCCGCATAGAAATTGCTGTAGCGGCGGCATACGTCCTGTCTGACGCGCTTGATAGAATCAAAATACCAAACATTATTACTGGATTCACAACTGCCGGTTGTATGGGTGTATCAAGCTCACGTTCAGCCAGTCGCATTGAACCTCTTTTTATGCCTACCCTGAAAAACTGGAATGAGAAAGCTAACTCAAGCACCTGCATGGCGCGTCTTGGATTATGCACCAATTCTATTCCACTGGCGAACAACGCTGACGGCGAGTCTATTCTGGCGCTGGCGCACCACCACAACGGAAGAACCGAGGATAAACAGATCATGCTGGTATTGTCTGACGGAGCGCCATGTGCCGCCGGTAGAGGATTCTCCGGGCATCTTGTGGATGTGGTCGATTTTATCACCAACAAAACCGCTATCGATATTCTGGCGGTCGGTATTCAGAGCAGCGCACCGGCTCATTACTACAAACATCATACCGAAGTCGATTCCGTGGATGATTTGCCTAAGACTGTTATCTCCGCGATCCGCAATCTGCTACTGACAGGAAAAGCCGGATTCTAGCCGCGATGTAGAAAATCTCTAAGCCGTGCTTCTATAGTATTTATATAGAT