Homologs in group_4224

Help

0 homologs were identified in 0 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product

Distribution of the homologs in the orthogroup group_4224

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_4224

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS18000
Feature type CDS
Gene -
Product hypothetical protein
Location 41432 - 42421 (strand: -1)
Length 990 (nucleotides) / 329 (amino acids)

Contig

Accession term accessions NZ_VXKB01000008 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 103951 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_4224
Orthogroup size 1
N. genomes 1

Actions

Genomic region

Domains

PF08804 gp32 DNA binding protein like

Protein Sequence

MSNLLALIRGKRKEMAEKRASRGVDIAKMQNGVQYLRIFPNFDDAEGVFFHPFGMHYAKTKEDGKEKVVASICRSVAFGEPCELCNTLMEAKAVHKGNKVMEEIIQDSRSSFRYLVNGALTATPDIRTAEKGQLIELPQTVFEDILKLIDEDMTDVIGNPLSATDGYCYMINRTGAGRETRYSVSPSRREGKAAIPEELKTGVLNLESFVKSQDDVNKYALTGKIIAASTGIAFSASSTLSLPATGTTGVGELPGFSSSKPADDVPFDTGAADAAKSAAAEASAVEFTGAADATASAAAVTPAAPVASPSNDSLAEQDLADMMKALEGV

Flanking regions ( +/- flanking 50bp)

AACAAACCAAACGTAAAAAAAACCTAACAAAACAAATTAAGGAACCTTGTATGTCAAACTTATTAGCTCTCATTCGCGGCAAGCGTAAAGAAATGGCAGAGAAACGCGCCAGTCGTGGCGTTGACATTGCCAAAATGCAAAACGGCGTACAGTATCTTCGCATCTTCCCTAACTTTGATGATGCTGAAGGAGTTTTCTTCCATCCGTTCGGTATGCACTATGCAAAAACCAAAGAAGACGGGAAAGAAAAAGTTGTCGCGTCAATCTGCCGCAGCGTAGCGTTTGGTGAACCATGTGAGTTGTGTAACACGCTGATGGAAGCAAAAGCGGTACACAAAGGCAACAAAGTGATGGAAGAAATCATTCAGGATTCACGGTCAAGTTTCCGCTATCTAGTGAACGGCGCACTGACCGCAACACCTGATATCAGAACTGCTGAAAAAGGTCAGCTTATCGAACTGCCTCAGACCGTCTTTGAAGACATTCTGAAACTTATCGACGAAGACATGACCGATGTTATCGGCAACCCACTGAGCGCGACTGATGGCTACTGTTACATGATCAACCGTACCGGTGCTGGTCGTGAAACTCGTTACTCTGTTTCACCATCCCGCCGTGAGGGTAAGGCTGCTATTCCGGAAGAACTGAAAACCGGCGTTCTGAACCTCGAAAGTTTTGTTAAGTCACAGGATGATGTAAACAAATACGCGCTGACCGGCAAAATTATTGCTGCGTCAACGGGTATCGCATTCTCCGCAAGCTCAACGCTTTCGCTGCCAGCAACCGGCACAACCGGTGTTGGTGAATTGCCGGGCTTTTCTTCTTCAAAACCGGCTGATGATGTTCCGTTTGACACAGGTGCTGCTGACGCAGCCAAGTCTGCTGCTGCGGAAGCCAGCGCAGTTGAGTTTACCGGCGCTGCTGATGCCACCGCATCCGCTGCTGCTGTTACTCCTGCTGCTCCGGTTGCTTCTCCGTCCAATGATTCCCTGGCAGAACAGGATCTGGCGGACATGATGAAAGCACTGGAAGGCGTTTAATTGTCAGAGTGAAATAAACGGGGGCGCATTCGTGCGCCCCTTGTTATTGG