Homologs in group_4217

Help

0 homologs were identified in 0 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product

Distribution of the homologs in the orthogroup group_4217

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_4217

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
O51221 0.000154 46 34 5 137 3 hflK Protein HflK Borreliella burgdorferi (strain ATCC 35210 / DSM 4680 / CIP 102532 / B31)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS17960
Feature type CDS
Gene -
Product SPFH domain-containing protein
Location 34883 - 35743 (strand: -1)
Length 861 (nucleotides) / 286 (amino acids)

Contig

Accession term accessions NZ_VXKB01000008 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 103951 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_4217
Orthogroup size 1
N. genomes 1

Actions

Genomic region

Domains

PF01145 SPFH domain / Band 7 family

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0330 Posttranslational modification, protein turnover, chaperones (O) O Regulator of protease activity HflC, stomatin/prohibitin superfamily

Protein Sequence

MNIRKGLMVAMLAVVSVVGLSGCERAKVPAGNVGIKVDLYGGDKGVQNEKLGTGKYWLTWNEEVYLFPLFKQMHQYEQPFVFQTSDSMSITASVGIEYRVVEDKVIEVFKTYRKGVQEITDNNIRQLIADSLINHGSRMNIDKLADGGKTALLESVTEDLRKQLAPVGIDIQKVSWLGKMEYPPEVVDAINKKNRAVQETQMRQNEIEKSKAEADKAIEEARGIAESTRLKAHADAEAITLRGDALRKNPEVIQLEAVNKWNGMMPKFIGGAAPMPFIDVGSETAQ

Flanking regions ( +/- flanking 50bp)

GTTGTGACGATTGACTGTTTTAAACAAATCAAAAAATGGAGTGTCCGTTAATGAATATTCGTAAAGGTCTGATGGTGGCTATGCTTGCTGTCGTTTCTGTAGTTGGTCTTTCAGGTTGTGAACGCGCCAAAGTTCCGGCTGGCAACGTTGGTATCAAAGTCGATCTGTACGGCGGCGACAAAGGCGTGCAAAACGAAAAACTCGGCACCGGAAAATACTGGCTGACATGGAATGAAGAAGTTTACCTCTTTCCTCTGTTTAAGCAGATGCACCAATACGAACAACCTTTCGTATTCCAAACCTCTGACAGCATGAGTATTACCGCATCGGTGGGTATTGAGTATCGCGTGGTTGAAGACAAAGTGATTGAAGTGTTCAAAACCTACCGCAAAGGCGTTCAGGAAATTACGGATAACAACATTCGCCAGTTAATCGCAGACTCTCTGATTAACCACGGTTCCAGAATGAATATCGACAAACTGGCGGACGGCGGCAAAACGGCTCTGCTGGAATCGGTCACAGAGGATTTACGCAAGCAATTGGCACCGGTCGGTATTGATATCCAGAAAGTGAGCTGGTTAGGCAAAATGGAGTACCCGCCGGAAGTTGTTGACGCTATCAACAAAAAGAACCGTGCCGTTCAGGAAACGCAGATGCGCCAGAACGAAATTGAAAAATCAAAAGCTGAGGCTGACAAAGCGATTGAGGAAGCCCGTGGTATTGCTGAATCAACCCGGCTGAAAGCACATGCAGACGCAGAAGCAATTACCCTGCGCGGTGATGCGCTGCGTAAGAATCCGGAAGTTATTCAGCTCGAAGCAGTGAATAAATGGAATGGCATGATGCCTAAGTTTATCGGCGGAGCAGCCCCGATGCCATTTATCGACGTTGGCAGCGAAACAGCACAATAACTCTGACCATTTAAAAGGCGCTGATTAAGCGCCTTTTTATTTAGCCATAA