Homologs in group_4215
0 homologs were identified in 0 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.
| Locus tag | Identity | Source | Gene | Product |
|---|
Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).
| Swissprot accession | Eval | Score | ID (%) | N gaps | Alignment length | Annot score | Gene | Description | Organism |
|---|---|---|---|---|---|---|---|---|---|
| Q934T6 | 1.33e-155 | 442 | 65 | 4 | 344 | 3 | repA | Replication protein RepA | Salmonella typhi |
| P0A253 | 4.21e-141 | 405 | 67 | 1 | 278 | 3 | repA | RepFIB replication protein A | Salmonella typhi |
| P0A254 | 4.21e-141 | 405 | 67 | 1 | 278 | 3 | repA | RepFIB replication protein A | Escherichia coli |
| Q51651 | 4.55e-141 | 405 | 67 | 1 | 278 | 3 | repA | RepFIB replication protein A | Escherichia coli |
| Q57154 | 5.72e-141 | 404 | 67 | 1 | 278 | 1 | repB | RepFIB replication protein A | Escherichia coli (strain K12) |
| Q52219 | 2.1e-140 | 403 | 67 | 1 | 278 | 3 | repA | RepFIB replication protein A | Escherichia coli |
| Q52347 | 4.82e-140 | 402 | 67 | 1 | 278 | 3 | repA | RepFIB replication protein A | Escherichia coli |
| P24042 | 3.21e-91 | 276 | 50 | 4 | 268 | 1 | repA | Replication protein RepA | Escherichia coli |
| P05833 | 1.95e-86 | 265 | 49 | 4 | 266 | 3 | repA | Protein RepA | Escherichia coli |
| Source | Morganella psychrotolerans |
|---|---|
| Locus tag | F4V73_RS17950 |
| Feature type | CDS |
| Gene | - |
| Product | RepB family plasmid replication initiator protein |
| Location | 33149 - 34156 (strand: 1) |
| Length | 1008 (nucleotides) / 335 (amino acids) |
| Accession | term accessions NZ_VXKB01000008 accessions NZ_VXKB01000000 Name: value, dtype: object |
|---|---|
| Length | 103951 nucleotides |
| Topology | linear |
| Plasmid | False |
| Orthogroup | group_4215 | |
|---|---|---|
| Orthogroup size | 1 | |
| N. genomes | 1 |
| PF01051 | Initiator Replication protein, WH1 |
|---|
MSIPNSELASAFTEVNKETGELITLTPNTNNTVQPVALMRLGLFVPTLKSTARSKRNLMSSMDATEELKQLSLAKSEGYNNIKITGERLDMDNDFKTWVGIIHSFAKHKVIGDKVTLKFVDFVKLCGIPSARSSKRLRERLDESLRRIVSTTLSFTNDSKAYHTHLVQSAFYDMDKDTVTIQADPKIFELYQFDHKVLLQLRAINELSRKESAQALYTFIESLPSNPIPVSLARLRARLNLKSRVNTQNATVRRALEQLKEIGYLDCTEVKKGNAVYFQIHERTPKLKKNKVVKTVKKVTTTKGRKTTVGSDDTVLAELTREELELLEKLRKSKK
CCACTGCGGGGAGTGTGCGAGATTAATCGCGGGGATAAATAGTGGCTGAGATATCAATACCTAACAGTGAATTGGCTTCTGCTTTTACGGAAGTAAACAAAGAAACAGGTGAGTTGATCACGCTGACACCAAATACGAATAACACCGTTCAGCCGGTCGCGCTTATGCGGCTCGGGTTGTTTGTACCGACACTAAAATCTACTGCCCGCAGCAAGCGAAACCTCATGTCCTCAATGGATGCCACCGAGGAATTAAAACAGCTTTCACTCGCTAAATCAGAGGGATATAACAATATCAAGATAACCGGTGAACGGCTTGATATGGATAACGACTTTAAAACGTGGGTCGGGATCATCCATTCGTTTGCAAAGCACAAAGTCATTGGTGACAAAGTCACCCTGAAATTTGTCGATTTCGTAAAGCTCTGCGGCATCCCGTCCGCGCGATCTTCAAAGCGGCTCAGAGAACGACTGGATGAATCACTGCGGCGCATCGTATCAACCACACTGTCATTCACAAATGATTCAAAGGCTTATCATACCCACCTTGTCCAATCTGCCTTTTATGACATGGACAAAGATACCGTAACGATACAGGCTGATCCGAAGATATTCGAGCTGTATCAGTTCGACCATAAGGTTTTACTCCAGTTGCGGGCAATCAATGAATTATCTCGTAAAGAGAGCGCACAGGCGCTCTACACGTTTATTGAGAGTCTGCCATCAAATCCTATCCCGGTGTCGCTGGCGCGACTCAGAGCGCGTTTGAACCTCAAATCAAGGGTTAACACTCAGAACGCCACTGTCCGACGGGCATTAGAACAGCTAAAAGAAATTGGCTATCTGGACTGCACTGAGGTTAAAAAAGGCAATGCGGTCTATTTTCAGATCCACGAACGCACCCCTAAGCTCAAGAAAAATAAGGTTGTTAAGACGGTCAAAAAAGTAACGACCACTAAAGGGAGAAAGACCACTGTAGGGAGTGACGATACGGTTTTAGCAGAACTGACAAGAGAAGAACTAGAATTGTTAGAAAAACTCAGGAAATCAAAGAAGTAACCGTGCAAAGACCGCTATAGAGAACATTTTCAAACAGACCGCTATAGAGA
